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DESeq2: Second order interactions
deseq2 written 19 hours ago by Pindre • 0
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Error with ComplexHeatmap. Showing only part of image.
complexheatmap written 9 hours ago by Goku • 0
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flowCore filterSummary toTable() function not working
flowcore flow cytometry written 11 hours ago by mahlon • 0
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1
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caught segfault error when loading S4Vectors package in R
R s4vectors segfault written 17 hours ago by ecg1g15 • 0 • updated 12 hours ago by Martin Morgan ♦♦ 23k
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Heatmap of RPKM analysis
normalization written 13 hours ago by Jojocc • 0
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Error in ENmix::bmiq.mc(): BMIQ estimates encountered error, try to run it again
watermelon methylation enmix bmiq written 9 days ago by moldach • 10
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News: List of Deprecated Package Bioc 3.9
experimentdata news software release devel deprecate written 18 hours ago by shepherl ♦♦ 1.1k
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Is it required to specify Outliers function in DESeq2
deseq2 written 21 hours ago by angajalaanusha • 10 • updated 18 hours ago by Michael Love ♦ 22k
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Different results in DESeq2 when using betaPrior=TRUE and betaPrior=FALSE
deseq2 written 21 hours ago by sven.schenk • 10 • updated 18 hours ago by Michael Love ♦ 22k
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The meaning of results produced by the bamQC function implemented in the ATACseqQC
atac-seq atacseqqc bamqc totalqnames mapq written 6 days ago by Gary • 0 • updated 18 hours ago by Julie Zhu • 4.0k
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Normalized transcript/exon counts for network analysis
dexseq sva wgcna drimseq written 3 days ago by maya.kappil • 0 • updated 18 hours ago by gosia.nowicka • 30
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DiffBind with highly variable FRiP (Fraction Reads in Peaks)
diffbind written 21 hours ago by GFM • 20
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How can I install DeSeq2 in Jupyter Notebook?
deseq2 written 1 day ago by david.wheeler7 • 0 • updated 21 hours ago by Michael Love ♦ 22k
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Featurecount -- normalized Path error
rsubread path written 5 weeks ago by memoly101 • 0 • updated 22 hours ago by cellfixnowusa • 0
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Tutorial: Reading 450k data in minfi
minfi 450k tutorial written 1 day ago by lalchungnungabt17 • 0
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21
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Tutorial: Reading csv file in minfi
minfi tutorial infinium 450k written 1 day ago by lalchungnungabt17 • 0
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NOOB question: How to use contrasts for subgroup analysis in DESeq2?
deseq deseq2 contrast subgroup written 1 day ago by ariel • 0
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MAGeCKFlute - Installation
mageckflute written 1 day ago by royce.wilkinson • 0
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My post stopped getting sent via email
bioconductor support site written 1 day ago by Julie Zhu • 4.0k
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Job: Computational Biology / Genomics Internship at Denali Therapeutics
genetics job genomics internship written 1 day ago by Steve Lianoglou ♦ 12k
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DESeq2 Multiple Comparison Testing with Contrasts
deseq2 written 1 day ago by jonathan.diedrich • 0 • updated 1 day ago by Michael Love ♦ 22k
3
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Why did I get NA p-values in DESeq with continuous variable?
deseq deseq2 p-value continuous written 1 day ago by ariel • 0
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Local versus parametric fitType in DESeq2 in this instance?
deseq2 rna-seq written 2 days ago by rebeliscu • 0 • updated 1 day ago by Michael Love ♦ 22k
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70
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[deseq2] normalization between samples after merging transcripts into genes
deseq2 tximport written 3 days ago by marie • 0 • updated 1 day ago by Michael Love ♦ 22k
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1
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Adding labels on clusters in a t-SNE plot and changing colors
ggplot2 rtsne scran scater scrna-seq written 1 day ago by hamza_karakurt • 0 • updated 1 day ago by Aaron Lun • 22k
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