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0
votes
1
answer
22
views
1
answer
Difference between AssocTestMM (GENESIS) and EMMAX? Why results are different?
gwas genesis assoctestmm written 12 hours ago by naglemi • 0 • updated 8 hours ago by mconomos • 20
0
votes
1
answer
55
views
1
answer
Please help with workspace error in R
R test fisher exact workspace written 19 hours ago by Sara • 0 • updated 9 hours ago by Aaron Lun • 21k
0
votes
0
answers
28
views
0
answers
Error in gmapR: gsnap not functioning
gmapr software error written 19 hours ago by Amer Ghalawinji • 0
0
votes
1
answer
37
views
1
answer
writeVcf save invalid vcf with metadata out of order
variantannotation written 4 days ago by alessandro.pastore • 20 • updated 11 hours ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
37
views
1
answer
EBImage computeFeatures error
ebimage image processing computefeatures written 22 hours ago by Mathieu Gendarme • 10 • updated 14 hours ago by Mike Smith • 3.1k
0
votes
0
answers
19
views
0
answers
Duplicate issue in ELMER get.pair for HNSC data
elmer hnsc written 14 hours ago by ghafarpour • 0
0
votes
1
answer
30
views
1
answer
Double nested design in DESeq2
deseq2 written 1 day ago by bioinfo • 0 • updated 16 hours ago by Michael Love ♦ 20k
0
votes
1
answer
30
views
1
answer
tximport and its version
stringtie tximport rna-seq analysis written 16 hours ago by Mithil Gaikwad • 0 • updated 16 hours ago by James W. MacDonald ♦ 48k
0
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0
answers
23
views
0
answers
Job: Postdoctoral researcher in Computational Metabolomics
metabolomics xcms job metabolism population written 16 hours ago by Johannes Rainer • 1.3k
0
votes
1
answer
23
views
1
answer
alpha in lfcshrink?
deseq2 written 17 hours ago by andrebolerbarros • 0 • updated 16 hours ago by Michael Love ♦ 20k
0
votes
1
answer
29
views
1
answer
How to keep the genes whose counts are equal or greater than 10
deseq2 filtering written 20 hours ago by n_h_78 • 0 • updated 17 hours ago by James W. MacDonald ♦ 48k
0
votes
1
answer
25
views
1
answer
Pre-filtering results influence on downstream analysis
rnaseq deseq2 written 19 hours ago by andrebolerbarros • 0 • updated 19 hours ago by Michael Love ♦ 20k
0
votes
0
answers
18
views
0
answers
adjustments in lfa
lfa written 20 hours ago by minsuns • 0
2
votes
1
answer
28
views
1
answer
Problems installing RBGL in R
rbgl r package problem written 22 hours ago by ngs06 • 10 • updated 21 hours ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
33
views
1
answer
Error in get(cdfname, object 'mm430mmentrezgcdf' not found
cdf affy rma written 1 day ago by Walter Jessen • 0 • updated 22 hours ago by Guido Hooiveld • 2.3k
0
votes
0
answers
21
views
0
answers
problem with DeMAND, gene expression matrix input
gene expression demand written 1 day ago by g.e.novakovsky • 0
6
votes
3
answers
116
views
3
answers
Pigengene : BN network using consensus module
pigengene written 18 days ago by rammohanshukla • 10 • updated 1 day ago by Habil Zare • 170
1
vote
1
answer
65
views
1
answer
Bug report for GenomicRanges
genomicranges written 5 days ago by gabriel.hoffman • 10 • updated 1 day ago by Michael Lawrence ♦ 10k
1
vote
1
answer
72
views
1
answer
IHW multiple testing correction
multiple testing correction ihw covariate distribution written 3 days ago by lara.h.urban • 0 • updated 1 day ago by Wolfgang Huber ♦ 13k
0
votes
0
answers
88
views
0
answers
Remove NaN from a list or replace NaN with a value.
R meta-analysis written 2 days ago by morteza.hadizade • 10
3
votes
3
answers
108
views
3
answers
What is colData? How do I make one?
deseq2 coldata written 6 days ago by mjrarcher • 0 • updated 3 days ago by swbarnes2 • 50
1
vote
1
answer
54
views
1
answer
DESeq2 namespace load fail
deseq2 written 3 days ago by bslocum • 0 • updated 3 days ago by Steve Lianoglou ♦ 12k
1
vote
0
answers
55
views
0
answers
Define batch effect variables before removing them or getting rid of hidden surrogate variables
proteomics sva batch effect correction written 3 days ago by Sebastian Hesse • 10
0
votes
0
answers
39
views
0
answers
Job: RNA Computational Biologist at Panorama Medicine in Philadelphia
job rna-seq written 3 days ago by Jeremy Leipzig • 70
0
votes
0
answers
39
views
0
answers
Best way of creating a large RleMatrix
delayedarray rlematrix written 3 days ago by maltethodberg • 100
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