3
votes
3
answers
336
views
9 follow
3
answers
2
votes
4
answers
10k
views
8 follow
4
answers
DEseq2 time-series design.
timecourse deseq2 design written 4.7 years ago by shao80 • updated 18 days ago by simon baldwin0
13
votes
3
answers
1.2k
views
6 follow
3
answers
DESeq2 1.20.0 lfcshrink function
deseq2 differential expression logfoldchange lfcthreshold lfcshrink written 13 months ago by emi.sch10 • updated 10 days ago by yusuf.zhc0
1
vote
3
answers
60
views
5 follow
3
answers
ATAC-QC shiftGAlignmentsList function
atac-seq atacseqqc written 5 days ago by Shuang He0 • updated 4 days ago by Julie Zhu4.0k
1
vote
2
answers
57
views
2
answers
Error in getBM
software error written 5 days ago by erockkirk10 • updated 3 days ago by YinCY0
1
vote
1
answer
103
views
1
answer
bug in "dispersion" argument in edgeR - rpkmByGroup
edger rpkm written 4 weeks ago by dario.beraldi0 • updated 29 days ago by rosehahn85830
0
votes
0
answers
68
views
0
answers
8
votes
2
answers
326
views
2
answers
2
votes
1
answer
64
views
1
answer
More Info on results names
deseq2 written 16 days ago by dennism92510
0
votes
0
answers
75
views
0
answers
Master of Science
cntools written 9 days ago by adeolu.ogunleye0 • updated 9 days ago by Martin Morgan ♦♦ 23k
1
vote
0
answers
37
views
0
answers
GDCprepare - error
tcgabiolinks gdcprepare written 6 days ago by vm0
0
votes
1
answer
68
views
1
answer
deseq2 pre filter rna seq
rnaseq deseq2 written 11 days ago by badribio0 • updated 10 days ago by zefrieira0
1
vote
2
answers
83
views
2
answers
Comparing two different sequencing method by DEseq2
deseq2 written 4 days ago by n.naharfancy0 • updated 4 days ago by swbarnes2220
5
votes
1
answer
124
views
1
answer
2
votes
1
answer
80
views
1
answer
RNA-Seq normalization for co-expression analysis
limma edger wgcna written 7 days ago by Lin40 • updated 6 days ago by Gordon Smyth37k
0
votes
1
answer
128
views
1
answer
Using output from normalizeBatch() outside of cydar package
cydar mass cytometry written 21 days ago by kenneth.baker0 • updated 21 days ago by Aaron Lun24k
0
votes
1
answer
256
views
1
answer
GeneGA Error Message
software error written 21 months ago by chulmelowe0 • updated 18 days ago by lynnamon0
0
votes
2
answers
79
views
2
answers
Normalized count in edger
edger written 23 days ago by mzillur0 • updated 23 days ago by theodore.georgomanolis0
3
votes
1
answer
54
views
1
answer
Discrepancies between topGO output and input
go topgo enrichment gene ontology written 16 days ago by t.bergmann0 • updated 15 days ago by James W. MacDonald50k
2
votes
1
answer
110
views
1
answer
0
votes
2
answers
85
views
2
answers
FNR in RNASeq
edger deseq2 written 22 days ago by prat0 • updated 21 days ago by Gordon Smyth37k
0
votes
2
answers
104
views
2
answers
Deseq issues - pipeline all of a sudden stopped working
deseq2 written 18 days ago by skamboj0 • updated 18 days ago by Michael Love24k
1
vote
1
answer
77
views
1
answer
Paired samples in cell lines using DESeq2
deseq2 written 11 days ago by Puks10 • updated 10 days ago by Michael Love24k
0
votes
0
answers
85
views
0
answers
0
votes
1
answer
187
views
1
answer
pathview: object 'bods' not found
pathview written 10 months ago by Shi-Xiang Wang0 • updated 1 day ago by anamaria0
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