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3
votes
1
answer
522
views
1
answer
best server maintenance practices
linux R server written 4.6 years ago by Matthew McCormack • 180 • updated 4.6 years ago by James W. MacDonald ♦ 49k
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0
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598
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0
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Dot Plot for a matrix
R bioconductor written 4.5 years ago by dktarathym • 0
4
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3
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3
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Please, could someone help me to export featureCounts (Rsubread) results?
rnaseq rsubread R featurecounts written 4.5 years ago by gustavoborin01 • 0
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2
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767
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Function for barplot
R written 4.5 years ago by dktarathym • 0
2
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1
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853
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Shoud I use "aligned reads" or total reads (aligned + unassigned) to the RPKM value?
rnaseq rsubread R rpkm written 4.5 years ago by gustavoborin01 • 0 • updated 4.5 years ago by James W. MacDonald ♦ 49k
0
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1
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820
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1
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VariantAnnotation Package Code problem
R bioconductor written 4.5 years ago by dktarathym • 0 • updated 4.5 years ago by Valerie Obenchain • 6.7k
3
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1
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3.3k
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1
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Trying to understand differential gene expression through Venn Diagrams from the 'limma' R package: why is there a number outside my diagram?
limma R venn diagram differential expression written 4.5 years ago by hmg • 0 • updated 4.5 years ago by James W. MacDonald ♦ 49k
2
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1.6k
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1
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AnnotatedDataFrame is not a defined class
biobase R annotateddataframe written 4.4 years ago by nonCodingGene • 10
0
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1
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575
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1
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GEOquery: How to use the tryCatch
geoquery R trycatch written 4.4 years ago by r.b.li • 0 • updated 4.4 years ago by Robert Castelo • 2.3k
3
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4
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821
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4
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CRAN policy and Bioconductor policy
R cran written 4.4 years ago by mattocci27 • 0 • updated 4.4 years ago by Henrik Bengtsson • 2.4k
2
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1
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1.8k
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1
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cummeRbund change point size in volcano plot
cummerbund R volcanoplot ggplot2 size written 4.4 years ago by ianmisner17 • 20 • updated 4.4 years ago by James W. MacDonald ♦ 49k
4
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2
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1.5k
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2
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Non-specific filtering methodogies for ExpressionSet in R/Bioconductor
genefilter R bioconductor differential gene expression written 4.3 years ago by svlachavas • 650 • updated 4.3 years ago by Gordon Smyth ♦ 37k
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895
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Loading Phyloseq into R- R crashes
phyloseq software error R written 4.3 years ago by locon833 • 0
0
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1
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734
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1
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Implementation of SAM statistical technique in R
R bioconductor sam written 4.3 years ago by svlachavas • 650 • updated 4.3 years ago by Simon Anders • 3.5k
6
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4
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3.0k
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4
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defining a function for multiple paired t.test in many rows of a microarray dataset
microarray R bioconductor t.test written 4.2 years ago by svlachavas • 650 • updated 4.2 years ago by Gordon Smyth ♦ 37k
2
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0
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826
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0
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News: Announcing a short course in computational and statistical proteomics
proteomics news R massspectrometry written 4.2 years ago by vitek.olga • 20
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2
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1.4k
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2
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rhdf5 package and arrays in R
rhdf5 R array arrays h5 written 4.2 years ago by FabioF • 0 • updated 4.2 years ago by Nathaniel Hayden • 180
3
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2
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8.8k
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5 follow
2
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Integrating DESeq2 and TopGO for Enrichment
rnaseq go deseq2 R written 4.2 years ago by nw328 • 10 • updated 4.2 years ago by Bernd Klaus • 540
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6.3k
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1
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Undertanding how DESeq2 handles multiple test conditions
rnaseq deseq2 R written 4.2 years ago by nw328 • 10 • updated 4.2 years ago by Ryan C. Thompson ♦ 7.3k
2
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1
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749
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1
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why genefilter does not work for me ?
microarray genefilter R written 4.2 years ago by Nemo • 80
1
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1
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1.0k
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1
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pd.mogene.2.0st Error Installing in R 3.1.2
microarray oligo R bioconductor written 4.2 years ago by chandlerjd58 • 0 • updated 4.2 years ago by Marc Carlson • 7.2k
1
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1
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639
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1
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Limma package for DNA copy number data
limma R written 4.2 years ago by djtml • 0 • updated 4.2 years ago by Aaron Lun • 23k
5
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3
answers
3.4k
views
5 follow
3
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sqliteSendQuery error in AnnotationForge bioconductor package
annotation annotationdbi annotationforge R bioconductor written 4.2 years ago by Stephen H • 0 • updated 2.8 years ago by Axel Klenk • 920
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668
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Gviz: DataTrack generating non-user data points?
gviz R written 4.2 years ago by melissalee0 • 0 • updated 4.1 years ago by florian.hahne@novartis.com • 1.6k
2
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549
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Is it possible some statistical evaluation with a few replicates and one control in microarray data analysis in r
R bioconductor affymetrix differential gene expression written 4.2 years ago by svlachavas • 650 • updated 4.2 years ago by James W. MacDonald ♦ 49k
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