9
votes
3
answers
4.4k
views
6 follow
3
answers
DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 3.2 years ago by Darya Vanichkina90 • updated 2.0 years ago by bioprog0
0
votes
1
answer
258
views
5 follow
1
answer
problem read.maimage("Agilent") -limma
annotation limma written 12.5 years ago by Gordon Smyth32k • updated 12.5 years ago by Sean Davis21k
0
votes
1
answer
408
views
5 follow
1
answer
removing packages from the workspace - is this ok?
annotation process written 6.6 years ago by J.delasHeras@ed.ac.uk1.9k • updated 6.6 years ago by Steve Lianoglou12k
2
votes
1
answer
1.4k
views
5 follow
1
answer
filtering probes in affymetrix data
annotation limma written 3.9 years ago by Sabet, Julia A180 • updated 3.9 years ago by James W. MacDonald45k
5
votes
3
answers
2.7k
views
5 follow
3
answers
9
votes
0
answers
2.4k
views
5 follow
0
answers
2
votes
1
answer
781
views
5 follow
1
answer
Goseq supported organism (felcat5) has an error when testing
genesetenrichment annotation goseq written 2.4 years ago by xyliu0020 • updated 2.4 years ago by Nadia Davidson270
0
votes
1
answer
419
views
1
answer
affy Yeast 2.0 annotation
annotation yeast affy limma annbuilder written 13.0 years ago by Jacob Michaelson320 • updated 13.0 years ago by Vincent J. Carey, Jr.6.2k
0
votes
1
answer
280
views
1
answer
0
votes
3
answers
394
views
3
answers
0
votes
2
answers
543
views
2
answers
GO over representation analysis
annotation go maanova written 9.4 years ago by Heike Pospisil310 • updated 9.4 years ago by Marc Carlson7.2k
0
votes
1
answer
523
views
1
answer
Retrieve Entrez IDs for enriched GO terms
microarray annotation go limma gostats biomart written 8.3 years ago by Yuan Hao80 • updated 8.3 years ago by Heidi Dvinge2.0k
0
votes
1
answer
417
views
1
answer
package pair "hugene10stv1cdf"/"hugene10stprobeset.db"
annotation cdf written 7.7 years ago by Laurent Gautier2.2k • updated 7.7 years ago by James W. MacDonald45k
0
votes
1
answer
458
views
1
answer
0
votes
2
answers
347
views
2
answers
org.*.eg.db problem
annotation organism written 7.1 years ago by arne.mueller@novartis.com200 • updated 7.2 years ago by Vincent J. Carey, Jr.6.2k
0
votes
1
answer
354
views
1
answer
Wheat annotation
annotation cdf annotationdbi written 5.6 years ago by Guest User12k • updated 5.6 years ago by James W. MacDonald45k
0
votes
1
answer
804
views
1
answer
Analysis and annotation (full) of Affymetrix Mouse Exon 1.0 ST arrays
annotation cdf written 5.6 years ago by Andreas Heider290 • updated 5.6 years ago by James W. MacDonald45k
0
votes
2
answers
4.2k
views
2
answers
Analysis of Affymetrix Mouse Gene 2.0 ST arrays
annotation normalization go process oligo written 4.9 years ago by Kamila Naxerova100 • updated 4.9 years ago by James W. MacDonald45k
2
votes
1
answer
1.7k
views
1
answer
Ensembl or Gencode version of TxDb.Hsapiens.UCSC.hg19.knownGene
annotation written 4.3 years ago by Adaikalavan Ramasamy220 • updated 4.3 years ago by James W. MacDonald45k
0
votes
1
answer
792
views
1
answer
GTF file error when using easyRNAseq�
annotation organism bsgenome deseq easyrnaseq written 4.2 years ago by Guest User12k • updated 4.2 years ago by delhomme@embl.de1.2k
4
votes
3
answers
1.4k
views
3
answers
Use R/Bioconductor to match BLAST hits to GO terms?
annotation go blast written 3.3 years ago by Jon Bråte130 • updated 3.3 years ago by Marc Carlson7.2k
1
vote
4
answers
1.0k
views
4
answers
reactome.db: reactome IDs not mapped to pathway names
annotation pathways written 3.2 years ago by Johannes Rainer1.1k • updated 2.8 years ago by willem.ligtenberg150
6
votes
3
answers
1.3k
views
3
answers
2
votes
2
answers
549
views
2
answers
0
votes
3
answers
476
views
3
answers
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