1
vote
2
answers
2.1k
views
2
answers
DiffBind for ATAC-seq
diffbind peak finding macs atac-seq macs2 written 18 months ago by igor20 • updated 11 months ago by kennethcondon200710
1
vote
2
answers
454
views
2
answers
loading dba.plotVolcano in DiffBind
chipseq diffbind atac-seq rory stark written 10 months ago by andrew.gehrke0 • updated 10 months ago by Rory Stark2.3k
0
votes
2
answers
417
views
2
answers
0
votes
2
answers
496
views
2
answers
DiffBind R package issue
diffbind atac-seq written 10 months ago by niu.shengyong0 • updated 10 months ago by Rory Stark2.3k
2
votes
2
answers
204
views
2
answers
Error When using dba.count() in DiffBind
diffbind dba.count atac-seq written 3 months ago by ew1520 • updated 3 months ago by Gord Brown560
4
votes
2
answers
166
views
2
answers
0
votes
2
answers
72
views
2
answers
ATACseqQC memory overflow issue
software error atac-seq atacseqqc written 12 days ago by José Luis Lavín10 • updated 3 days ago by Haibo.Liu0
0
votes
1
answer
620
views
1
answer
DiffBind Normalization by bFullLibrarySize
atac-seq written 23 months ago by simonjean43410 • updated 23 months ago by Rory Stark2.3k
3
votes
1
answer
523
views
1
answer
How to normalize chromatin and RNA-Seq data together ?
sva deseq2 combat atac atac-seq written 12 months ago by g.atla0 • updated 12 months ago by Michael Love16k
0
votes
1
answer
283
views
1
answer
DiffBind: failed to run dba.count in SSH
atac-seq ssh written 9 months ago by zhaolin200420080 • updated 9 months ago by Gord Brown560
0
votes
1
answer
231
views
1
answer
Homer getDiffExpression.pl issue
atac-seq homer written 7 months ago by niu.shengyong0 • updated 7 months ago by Maciej Jończyk0
0
votes
1
answer
109
views
1
answer
Error with dba.count function code
diffbind dba.count atac-seq written 4 months ago by VCLRAC0010 • updated 4 months ago by Gord Brown560
1
vote
1
answer
189
views
1
answer
4
votes
1
answer
215
views
1
answer
Rsubread counting peaks ATACseq
rsubread narrowpeaks featurecounts atac-seq written 3 months ago by j.bergenstrahle70 • updated 3 months ago by Wei Shi2.7k
0
votes
1
answer
527
views
1
answer
Calling differential peaks from ATAC-seq data using DEseq2
deseq2 atac-seq written 3 months ago by zhongjixx0 • updated 3 months ago by Rory Stark2.3k
0
votes
1
answer
171
views
1
answer
Warnings when update DiffBind and running errors
diffbind dba.count atac-seq written 3 months ago by zhaolin200420080 • updated 3 months ago by Rory Stark2.3k
4
votes
1
answer
132
views
1
answer
DESeq2 design and stats question
deseq deseq2 differential binding analysis atac-seq written 28 days ago by rbronste50 • updated 27 days ago by Michael Love16k
0
votes
0
answers
752
views
0
answers
0
votes
0
answers
482
views
0
answers
0
votes
0
answers
234
views
0
answers
1
vote
0
answers
285
views
0
answers
0
votes
0
answers
142
views
0
answers
0
votes
0
answers
70
views
0
answers
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