Showing: atacseqqc • reset
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3
votes
2
answers
1.2k
views
2
answers
mm10 phastCons data for use with ATACseqQC
bsgenome rtracklayer phastcons atacseqqc written 2.2 years ago by crysis405 • 10 • updated 2.2 years ago by Ou, Jianhong • 1.1k
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2
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362
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2
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ATACseqQC needs too much memory
atacseqqc written 20 months ago by mdurante14 • 0 • updated 20 months ago by Julie Zhu • 4.0k
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2
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563
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2
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ATACseqQC memory overflow issue
software error atac-seq atacseqqc written 18 months ago by José Luis Lavín • 10 • updated 18 months ago by Haibo.Liu • 0
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1
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505
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1
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Issue installing packages ATACseqQC and GO.db
biocinstaller go.db package installation atacseqqc written 17 months ago by n.pantelireis16 • 0 • updated 17 months ago by Ou, Jianhong • 1.1k
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1
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211
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1
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ATACseqQC questions in R language
atacseqqc written 14 months ago by rsong • 0 • updated 14 months ago by Ou, Jianhong • 1.1k
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1
answer
283
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1
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ATACseqQC: a few questions
atacseqqc written 13 months ago by david.mckinnon • 0 • updated 13 months ago by Julie Zhu • 4.0k
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2
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298
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2
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use factorFootprints function in ATACseqQC to get DNA footprinting for certain gene region
atacseqqc written 13 months ago by aimin.at.work • 0 • updated 13 months ago by Julie Zhu • 4.0k
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1
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237
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1
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Compare the DNA footprinting between different samples when using ATACseqQC
atacseqqc written 13 months ago by aimin.at.work • 0 • updated 13 months ago by Ou, Jianhong • 1.1k
10
votes
1
answer
930
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1
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How about our ATAC-Seq data quality analyzed by ATACseqQC
atac-seq atacseqqc quality analysis fragment size distribution library complexity written 6 months ago by Gary • 10 • updated 6 months ago by Julie Zhu • 4.0k
2
votes
2
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208
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2
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The meaning of results produced by the bamQC function implemented in the ATACseqQC
atac-seq atacseqqc bamqc totalqnames mapq written 6 months ago by Gary • 10 • updated 5 months ago by Julie Zhu • 4.0k
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0
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99
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0
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Enough cell number or not based on library complexity evaluation by ATACseqQC?
atac-seq atacseqqc library complexity estimatelibcomplexity written 4 months ago by Gary • 10
0
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1
answer
216
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1
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atacseqQC error while splittin the bamfile
error atac-seq atacseqqc split bam file written 3 months ago by theodore.georgomanolis • 0 • updated 3 months ago by contact • 0
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0
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124
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ATACseqQC shiftGAlignmentsList leads to (all(elementNROWS)>3) is not TRUE error
software error atac tutorial atacseqqc atacseq written 8 weeks ago by mbasam • 0 • updated 8 weeks ago by Steve Lianoglou ♦ 12k
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1
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80
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1
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ATAC-QC fragSizeDist function
atac-seq atacseqqc written 5 weeks ago by Shuang He • 0 • updated 5 weeks ago by Julie Zhu • 4.0k
1
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3
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136
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5 follow
3
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ATAC-QC shiftGAlignmentsList function
atac-seq atacseqqc written 5 weeks ago by Shuang He • 0 • updated 4 weeks ago by Julie Zhu • 4.0k
0
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1
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121
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1
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ATACseqQC splitGAlignmentsByCut: strand values must be in '+' '-' '*'
R atacseqqc written 5 weeks ago by mbasam • 0 • updated 5 weeks ago by Julie Zhu • 4.0k
1
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0
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63
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0
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ATACseqQC function bamSplit returns error when input .bam is from mouse
atacseqqc written 18 days ago by beiting • 30
0
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1
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56
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1
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factorFootprints, bindingSites and Profile.segmentation
atacseqqc factorfootprints written 14 days ago by Nick Gomez • 0 • updated 14 days ago by Julie Zhu • 4.0k
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