Showing: atacseqqc • reset
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3
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2
answers
1.3k
views
2
answers
mm10 phastCons data for use with ATACseqQC
bsgenome rtracklayer phastcons atacseqqc written 2.5 years ago by crysis405 • 10 • updated 2.5 years ago by Ou, Jianhong • 1.2k
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2
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404
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2
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ATACseqQC needs too much memory
atacseqqc written 2.0 years ago by mdurante14 • 0 • updated 2.0 years ago by Julie Zhu • 4.1k
0
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2
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635
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2
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ATACseqQC memory overflow issue
software error atac-seq atacseqqc written 22 months ago by José Luis Lavín • 10 • updated 21 months ago by Haibo.Liu • 0
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1
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580
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1
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Issue installing packages ATACseqQC and GO.db
biocinstaller go.db package installation atacseqqc written 20 months ago by n.pantelireis16 • 0 • updated 20 months ago by Ou, Jianhong • 1.2k
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1
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238
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1
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ATACseqQC questions in R language
atacseqqc written 18 months ago by rsong • 0 • updated 18 months ago by Ou, Jianhong • 1.2k
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1
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317
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1
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ATACseqQC: a few questions
atacseqqc written 17 months ago by david.mckinnon • 0 • updated 17 months ago by Julie Zhu • 4.1k
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2
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336
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2
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use factorFootprints function in ATACseqQC to get DNA footprinting for certain gene region
atacseqqc written 17 months ago by aimin.at.work • 0 • updated 17 months ago by Julie Zhu • 4.1k
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1
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277
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1
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Compare the DNA footprinting between different samples when using ATACseqQC
atacseqqc written 16 months ago by aimin.at.work • 0 • updated 16 months ago by Ou, Jianhong • 1.2k
11
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1
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1.3k
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1
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How about our ATAC-Seq data quality analyzed by ATACseqQC
atac-seq atacseqqc quality analysis fragment size distribution library complexity written 10 months ago by Gary • 20 • updated 10 months ago by Julie Zhu • 4.1k
2
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2
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266
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2
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The meaning of results produced by the bamQC function implemented in the ATACseqQC
atac-seq atacseqqc bamqc totalqnames mapq written 9 months ago by Gary • 20 • updated 9 months ago by Julie Zhu • 4.1k
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168
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Enough cell number or not based on library complexity evaluation by ATACseqQC?
atac-seq atacseqqc library complexity estimatelibcomplexity written 8 months ago by Gary • 20
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1
answer
369
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1
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atacseqQC error while splittin the bamfile
error atac-seq atacseqqc split bam file written 7 months ago by theodore.georgomanolis • 0 • updated 7 months ago by contact • 0
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0
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231
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ATACseqQC shiftGAlignmentsList leads to (all(elementNROWS)>3) is not TRUE error
software error atac tutorial atacseqqc atacseq written 5 months ago by mbasam • 0 • updated 5 months ago by Steve Lianoglou ♦ 12k
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1
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124
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1
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ATAC-QC fragSizeDist function
atac-seq atacseqqc written 4 months ago by Shuang He • 0 • updated 4 months ago by Julie Zhu • 4.1k
1
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3
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228
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5 follow
3
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ATAC-QC shiftGAlignmentsList function
atac-seq atacseqqc written 4 months ago by Shuang He • 0 • updated 4 months ago by Julie Zhu • 4.1k
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1
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193
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1
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ATACseqQC splitGAlignmentsByCut: strand values must be in '+' '-' '*'
R atacseqqc written 4 months ago by mbasam • 0 • updated 4 months ago by Julie Zhu • 4.1k
1
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0
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131
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0
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ATACseqQC function bamSplit returns error when input .bam is from mouse
atacseqqc written 4 months ago by beiting • 30
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1
answer
129
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1
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factorFootprints, bindingSites and Profile.segmentation
atacseqqc factorfootprints written 4 months ago by Nick Gomez • 0 • updated 4 months ago by Julie Zhu • 4.1k
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1
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91
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1
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ATACseqQC installation fails at shiny step
atacseqqc written 3 months ago by kesarwani.anil • 0 • updated 3 months ago by James W. MacDonald ♦ 52k
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