Showing: bamreset
7
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119
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Convert BAM to FASTQ
bam fastq written 8 weeks ago by ioannis.vardaxis30 • updated 8 weeks ago by Martin Morgan ♦♦ 23k
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208
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0
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1
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280
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Plotting coverage from bam files
bam plot written 12 months ago by gv40 • updated 12 months ago by James W. MacDonald50k
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0
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319
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Rsamtools insert size
rsamtools bam samtools bowtie2 written 15 months ago by igor20
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251
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0
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269
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2
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1
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536
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CAGEr BAM files size issue
biostrings cager software error R bam written 22 months ago by orzechowska.mag10 • updated 21 months ago by Charles Plessy90
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523
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1
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Gviz off-by-one with STAR BAM
coverage gviz bam star off-by-one written 2.2 years ago by bernt.popp0 • updated 2.2 years ago by Martin Morgan ♦♦ 23k
1
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683
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1
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Gviz sashimi read count
gviz bam read counting sashimi plots sashimi written 2.2 years ago by bernt.popp0 • updated 2.2 years ago by Robert Ivanek590
3
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1
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596
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1
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0
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0
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651
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0
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4
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1
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626
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1
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bamsignals - bamcoverage has no strand-specific option??
coverage bam bamsignals written 2.4 years ago by gtho12340 • updated 2.3 years ago by helmuth0
4
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1
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1.6k
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Rsubread featureCounts with strand information
rnaseq rsubread bam written 2.4 years ago by rubi90 • updated 2.4 years ago by Aaron Lun23k
3
votes
1
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540
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1
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Plotting only intergenic reads on chromosomes?
genomegraphs rsamtools gviz bam samtools written 2.8 years ago by Mehmet Ilyas Cosacak0 • updated 2.8 years ago by Martin Morgan ♦♦ 23k
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536
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Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 2.8 years ago by rubi90 • updated 2.8 years ago by Gordon Smyth37k
1
vote
1
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454
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CopywriteR can't finish calculating copy number
bam copywriter written 3.0 years ago by thestaroceanster0 • updated 3.0 years ago by t.kuilman140
2
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2
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686
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2
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1
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1.6k
views
1
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3
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1.0k
views
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about VCF and BAM files
bam snv written 3.1 years ago by Bogdan550
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1
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635
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Reading BAM file for RapidR
bam rapidr written 3.2 years ago by Sushant Pawar0 • updated 3.2 years ago by Aaron Lun23k
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739
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diffHic preparePairs() does not identify paired-end reads
bam paired diffhic preparepairs written 3.3 years ago by ilyco0 • updated 3.3 years ago by Aaron Lun23k
3
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1
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734
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Read in specific rows of a BAM file that match a certain RNAME
bam scanbamparam written 3.4 years ago by K50 • updated 3.4 years ago by Martin Morgan ♦♦ 23k
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977
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1
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1.1k
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1
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Rsamtools memory leak
iranges rsamtools granges bam scanbam written 3.6 years ago by mhills10
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862
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