1
vote
1
answer
112
views
1
answer
0
votes
1
answer
147
views
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Batch effect removal with Deseq2
limma deseq2 removebatcheffect() batch effect written 9 weeks ago by lirongrossmann0 • updated 9 weeks ago by Michael Love16k
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votes
1
answer
117
views
1
answer
Single and double mutant DEG analysis using DESeq2
rnaseq deseq2 batch effect written 10 weeks ago by Cloud0 • updated 10 weeks ago by Michael Love16k
1
vote
1
answer
157
views
1
answer
Batch effect removal before SC3?
batch effect removebatcheffect sc3 written 11 weeks ago by muad.abdelhay10 • updated 11 weeks ago by Vladimir Kiselev130
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votes
1
answer
150
views
1
answer
0
votes
1
answer
189
views
1
answer
0
votes
0
answers
104
views
0
answers
1
vote
1
answer
199
views
1
answer
deseq2 correcting for batch effects
deseq2 removebatcheffect() batch effect design matrix written 4 months ago by Assa Yeroslaviz1.3k • updated 4 months ago by Michael Love16k
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votes
1
answer
114
views
1
answer
Discrepancy in extracting contrasts
deseq2 contrast batch effect resultsnames written 4 months ago by pkachroo10 • updated 4 months ago by Michael Love16k
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votes
0
answers
164
views
0
answers
0
votes
0
answers
405
views
0
answers
1
vote
1
answer
592
views
1
answer
Scater normalizeExprs() batch effect
batch effect scater written 6 months ago by Jenn20 • updated 6 months ago by Aaron Lun18k
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votes
2
answers
658
views
2
answers
2
votes
1
answer
139
views
1
answer
Plotting Gene Expression Data From Multiple Batches
microarray plot batch effect written 7 months ago by thyagoleal20 • updated 7 months ago by Jenny Drnevich1.9k
2
votes
1
answer
415
views
1
answer
2
votes
1
answer
198
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1
answer
gene expression data analysis and batch effect methods
batch effect gene expression written 9 months ago by tati64060 • updated 9 months ago by chris86360
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189
views
0
answers
0
votes
1
answer
338
views
1
answer
0
votes
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answers
246
views
0
answers
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votes
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303
views
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answers
3
votes
2
answers
640
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answers
3
votes
2
answers
391
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2
answers
0
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260
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About experimental design of RNA-seq
wgcna block time course batch effect written 11 months ago by xie1860 • updated 11 months ago by Michael Love16k
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vote
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answer
251
views
1
answer
0
votes
0
answers
273
views
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