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0
votes
1
answer
112
views
1
answer
rtracklayer cannot export empty BED file
rtracklayer genomicranges bed written 9 weeks ago by foehn • 10 • updated 9 weeks ago by Michael Lawrence ♦ 10k
0
votes
0
answers
75
views
0
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Plotting bed8 with Sushi possible?
bed sushi written 3 months ago by maltethodberg • 100
0
votes
1
answer
112
views
1
answer
comparing 2 long BED files in R in an efficient way
vcf bed written 6 months ago by Bogdan • 530 • updated 6 months ago by GENOMIC_region • 0
2
votes
1
answer
285
views
1
answer
GRanges object from gene list
genomeintervals genomicranges deseq2 granges bed written 12 months ago by rbronste • 60
1
vote
1
answer
381
views
1
answer
Can rtracklayer import tab-delimited BED files with unquoted spaces in fields?
rtracklayer software error bed written 16 months ago by Ryan C. Thompson ♦ 7.1k • updated 16 months ago by Michael Lawrence ♦ 10k
0
votes
1
answer
632
views
1
answer
Plot per-base-coverage output of a bed file of whole genome
coverage bed written 17 months ago by sgupt46 • 0 • updated 17 months ago by James W. MacDonald ♦ 49k
5
votes
1
answer
373
views
1
answer
AnnotationHub: two broad peaks from same url are not the same
annotationhub bugs bed encode written 2.1 years ago by wcstcyx • 30
2
votes
2
answers
986
views
2
answers
Importing a BED file with floating point scores?
rtracklayer bed written 2.8 years ago by Ryan C. Thompson ♦ 7.1k • updated 2.8 years ago by Michael Lawrence ♦ 10k
1
vote
1
answer
713
views
1
answer
rtracklayer::import()-ing .bed.gz files from a URL
rtracklayer bed import written 2.8 years ago by Peter Hickey • 440 • updated 2.8 years ago by Michael Lawrence ♦ 10k
3
votes
5
answers
701
views
5
answers
UcscTrack and BED without headers
gviz ucsc bed ucsctrack written 3.0 years ago by Andy91 • 60
1
vote
2
answers
569
views
2
answers
NAs values when importing BED file using import function
rtracklayer na bed getseq written 3.2 years ago by Dimitris Polychronopoulos • 50
0
votes
0
answers
875
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0
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Error reading vcf converted from bed file
bioc-devel readvcf plink file conversion bed written 3.8 years ago by mjsduncan • 0
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