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0
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1
answer
183
views
1
answer
rtracklayer cannot export empty BED file
rtracklayer genomicranges bed written 6 months ago by foehn • 50 • updated 6 months ago by Michael Lawrence ♦ 11k
0
votes
0
answers
127
views
0
answers
Plotting bed8 with Sushi possible?
bed sushi written 7 months ago by maltethodberg • 110
0
votes
1
answer
170
views
1
answer
comparing 2 long BED files in R in an efficient way
vcf bed written 10 months ago by Bogdan • 550 • updated 10 months ago by GENOMIC_region • 0
2
votes
1
answer
332
views
1
answer
GRanges object from gene list
genomeintervals genomicranges deseq2 granges bed written 16 months ago by rbronste • 60
1
vote
1
answer
440
views
1
answer
Can rtracklayer import tab-delimited BED files with unquoted spaces in fields?
rtracklayer software error bed written 20 months ago by Ryan C. Thompson ♦ 7.3k • updated 20 months ago by Michael Lawrence ♦ 11k
0
votes
1
answer
693
views
1
answer
Plot per-base-coverage output of a bed file of whole genome
coverage bed written 21 months ago by sgupt46 • 0 • updated 21 months ago by James W. MacDonald ♦ 50k
5
votes
1
answer
415
views
1
answer
AnnotationHub: two broad peaks from same url are not the same
annotationhub bugs bed encode written 2.5 years ago by wcstcyx • 30
2
votes
2
answers
1.1k
views
2
answers
Importing a BED file with floating point scores?
rtracklayer bed written 3.1 years ago by Ryan C. Thompson ♦ 7.3k • updated 3.1 years ago by Michael Lawrence ♦ 11k
1
vote
1
answer
804
views
1
answer
rtracklayer::import()-ing .bed.gz files from a URL
rtracklayer bed import written 3.2 years ago by Peter Hickey • 440 • updated 3.2 years ago by Michael Lawrence ♦ 11k
3
votes
5
answers
759
views
5
answers
UcscTrack and BED without headers
gviz ucsc bed ucsctrack written 3.4 years ago by Andy91 • 60
1
vote
2
answers
615
views
2
answers
NAs values when importing BED file using import function
rtracklayer na bed getseq written 3.5 years ago by Dimitris Polychronopoulos • 50
0
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0
answers
943
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0
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Error reading vcf converted from bed file
bioc-devel readvcf plink file conversion bed written 4.2 years ago by mjsduncan • 0
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