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0
votes
1
answer
214
views
1
answer
rtracklayer cannot export empty BED file
rtracklayer genomicranges bed written 8 months ago by foehn • 60 • updated 8 months ago by Michael Lawrence ♦ 11k
0
votes
0
answers
145
views
0
answers
Plotting bed8 with Sushi possible?
bed sushi written 10 months ago by maltethodberg • 130
0
votes
1
answer
191
views
1
answer
comparing 2 long BED files in R in an efficient way
vcf bed written 12 months ago by Bogdan • 560 • updated 12 months ago by GENOMIC_region • 0
2
votes
1
answer
373
views
1
answer
GRanges object from gene list
genomeintervals genomicranges deseq2 granges bed written 18 months ago by rbronste • 60
1
vote
1
answer
466
views
1
answer
Can rtracklayer import tab-delimited BED files with unquoted spaces in fields?
rtracklayer software error bed written 22 months ago by Ryan C. Thompson ♦ 7.3k • updated 22 months ago by Michael Lawrence ♦ 11k
0
votes
1
answer
726
views
1
answer
Plot per-base-coverage output of a bed file of whole genome
coverage bed written 23 months ago by sgupt46 • 0 • updated 23 months ago by James W. MacDonald ♦ 50k
5
votes
1
answer
437
views
1
answer
AnnotationHub: two broad peaks from same url are not the same
annotationhub bugs bed encode written 2.6 years ago by wcstcyx • 30
2
votes
2
answers
1.3k
views
2
answers
Importing a BED file with floating point scores?
rtracklayer bed written 3.3 years ago by Ryan C. Thompson ♦ 7.3k • updated 3.3 years ago by Michael Lawrence ♦ 11k
1
vote
1
answer
858
views
1
answer
rtracklayer::import()-ing .bed.gz files from a URL
rtracklayer bed import written 3.3 years ago by Peter Hickey • 450 • updated 3.3 years ago by Michael Lawrence ♦ 11k
3
votes
5
answers
792
views
5
answers
UcscTrack and BED without headers
gviz ucsc bed ucsctrack written 3.5 years ago by Andy91 • 60
1
vote
2
answers
640
views
2
answers
NAs values when importing BED file using import function
rtracklayer na bed getseq written 3.7 years ago by Dimitris Polychronopoulos • 50
0
votes
0
answers
978
views
0
answers
Error reading vcf converted from bed file
bioc-devel readvcf plink file conversion bed written 4.3 years ago by mjsduncan • 0
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