1
vote
1
answer
9.0k
views
1
answer
reading fasta file into R
biostrings written 5.7 years ago by Guest User12k • updated 5.7 years ago by Vincent J. Carey, Jr.6.2k
0
votes
2
answers
2.4k
views
2
answers
0
votes
1
answer
2.3k
views
1
answer
Biostrings throwing error
biostrings installation package keepna written 2.7 years ago by prim-and-proper0 • updated 2.7 years ago by James W. MacDonald46k
5
votes
1
answer
2.0k
views
1
answer
0
votes
3
answers
1.6k
views
3
answers
Biostring: print sequence alignment to file
alignment biostrings written 6.0 years ago by Martin Preusse100 • updated 6.0 years ago by Thomas Girke1.6k
8
votes
3
answers
1.6k
views
3
answers
Algorithm description for matchPWM (Biostrings)
biostrings matchpwm written 3.6 years ago by Yue Li370 • updated 3.6 years ago by Hervé Pagès ♦♦ 13k
4
votes
2
answers
1.2k
views
2
answers
0
votes
1
answer
1.1k
views
1
answer
read.DNAStringSet
biostrings written 8.1 years ago by Ron Ophir60 • updated 8.1 years ago by Thomas Girke1.6k
0
votes
6
answers
1.1k
views
6
answers
0
votes
0
answers
987
views
0
answers
2
votes
1
answer
964
views
1
answer
getSeq with GRanges object error: function not found
bsgenome biostrings granges written 3.6 years ago by Miskey, Csaba20 • updated 3.6 years ago by Martin Morgan ♦♦ 21k
0
votes
3
answers
950
views
3
answers
BLAST search sequence for species ID from R?
biostrings process written 8.4 years ago by jos matejus30 • updated 8.4 years ago by Michael Dondrup550
0
votes
1
answer
921
views
1
answer
Creating a package
saccharomyces cerevisiae bsgenome biostrings written 3.9 years ago by Guest User12k • updated 3.9 years ago by James W. MacDonald46k
0
votes
0
answers
914
views
0
answers
4
votes
1
answer
899
views
1
answer
6
votes
1
answer
895
views
1
answer
Comparing read sequence back to reference sequence
biostrings genomicalignments bam indel written 3.4 years ago by Stefanie Tauber40 • updated 3.4 years ago by Nathaniel Hayden ♦♦ 180
1
vote
3
answers
865
views
3
answers
0
votes
1
answer
826
views
1
answer
Fisher-Yates algorithm for DNA shuffling ?
biostrings written 8.8 years ago by Robert Castelo2.1k • updated 8.8 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
804
views
2
answers
PWM matching using matchPWM in Biostrings
transcription bsgenome biostrings written 8.9 years ago by Kristoffer Rigbolt10 • updated 8.9 years ago by Patrick Aboyoun1.6k
5
votes
1
answer
801
views
1
answer
0
votes
1
answer
800
views
1
answer
Map siRNA-Sequence to Gene
biostrings annotationhub sequence written 2.7 years ago by antje.janosch0 • updated 2.7 years ago by Hervé Pagès ♦♦ 13k
1
vote
1
answer
793
views
1
answer
4
votes
1
answer
792
views
1
answer
IRanges/ShortRead causing crash?
biostrings iranges shortread written 2.4 years ago by pavitrarc20 • updated 2.4 years ago by Martin Morgan ♦♦ 21k
0
votes
2
answers
791
views
2
answers
Mapping genomic coordinates to transcript coordinates? (revived)
biostrings genomicfeatures written 7.1 years ago by Hervé Pagès ♦♦ 13k • updated 7.1 years ago by Michael Lawrence10.0k
4
votes
1
answer
760
views
1
answer
Chromosome position to nucleotide - Biostrings?
biostrings written 3.5 years ago by Brian Smith110 • updated 3.5 years ago by Julian Gehring1.3k
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