8
votes
3
answers
1.4k
views
3
answers
Algorithm description for matchPWM (Biostrings)
biostrings matchpwm written 3.2 years ago by Yue Li370 • updated 3.2 years ago by Hervé Pagès ♦♦ 13k
3
votes
1
answer
666
views
1
answer
Chromosome position to nucleotide - Biostrings?
biostrings written 3.1 years ago by Brian Smith90 • updated 3.1 years ago by Julian Gehring1.3k
2
votes
1
answer
879
views
1
answer
getSeq with GRanges object error: function not found
bsgenome biostrings granges written 3.2 years ago by Miskey, Csaba20 • updated 3.2 years ago by Martin Morgan ♦♦ 20k
4
votes
1
answer
795
views
1
answer
2
votes
1
answer
476
views
1
answer
Comparing AAStrings using identical() instead of ==
biostrings identical aastring == written 3.0 years ago by jdavison10 • updated 2.9 years ago by Hervé Pagès ♦♦ 13k
3
votes
1
answer
662
views
1
answer
Reading large DNA alignments and keeping polymorphic sites
alignment biostrings sequence written 2.9 years ago by ben.ward30 • updated 2.9 years ago by Hervé Pagès ♦♦ 13k
5
votes
1
answer
1.6k
views
1
answer
2
votes
2
answers
319
views
2
answers
1
vote
1
answer
563
views
1
answer
4
votes
1
answer
686
views
1
answer
IRanges/ShortRead causing crash?
biostrings iranges shortread written 2.0 years ago by pavitrarc20 • updated 2.0 years ago by Martin Morgan ♦♦ 20k
4
votes
1
answer
330
views
1
answer
IRanges, Partitioning by End function not found.
biostrings iranges written 22 months ago by ben.ward30 • updated 22 months ago by Martin Morgan ♦♦ 20k
3
votes
1
answer
260
views
1
answer
how to catch an error when using subseq() in vectorized way
biostrings subseq written 9 months ago by tobias.kockmann20 • updated 9 months ago by Martin Morgan ♦♦ 20k
2
votes
1
answer
208
views
1
answer
CAGEr BAM files size issue
biostrings cager software error R bam written 4 months ago by orzechowska.mag10 • updated 3 months ago by Charles Plessy30
2
votes
1
answer
85
views
1
answer
msa: How to obtain a subset of an alignment
biostrings msa multiplealignment written 8 weeks ago by Christof Winter10 • updated 8 weeks ago by UBodenhofer200
0
votes
0
answers
402
views
0
answers
0
votes
0
answers
322
views
0
answers
0
votes
1
answer
344
views
1
answer
is Biostrings being maintained?
biostrings written 12.1 years ago by Marcus G. Daniels30 • updated 12.1 years ago by rgentleman5.5k
0
votes
3
answers
330
views
3
answers
advice on Biostrings
biostrings written 11.8 years ago by Rafael A. Irizarry2.3k • updated 11.8 years ago by Martin Morgan ♦♦ 20k
0
votes
2
answers
188
views
2
answers
[biocpkgs] suggestions on package matchprobes
cancer biostrings written 11.2 years ago by rgentleman5.5k • updated 11.2 years ago by Xinxia Peng120
0
votes
4
answers
403
views
4
answers
DNAString ("GC") -- error in nchar?
biostrings written 10.2 years ago by Paul Shannon1.1k • updated 10.2 years ago by Martin Morgan ♦♦ 20k
0
votes
0
answers
231
views
0
answers
0
votes
1
answer
444
views
1
answer
Installing BioC + R 2.6: warnings
biostrings written 10.1 years ago by Paolo Innocenti320 • updated 10.1 years ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
604
views
2
answers
sequence search using a position weight matrix?
biostrings cosmo written 10.1 years ago by Paul Shannon1.1k • updated 10.1 years ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
285
views
1
answer
0
votes
1
answer
223
views
1
answer
BioC2008 Talks and Lab Materials?
alignment go biostrings written 9.3 years ago by Jenny Drnevich1.9k • updated 9.3 years ago by Florian Hahne540
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