0
votes
2
answers
170
views
2
answers
0
votes
1
answer
80
views
1
answer
1
vote
2
answers
116
views
2
answers
Errors with makeTxDbFromBiomart
chip-seq written 9 weeks ago by gnani.science0 • updated 9 weeks ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
351
views
1
answer
2
votes
1
answer
583
views
1
answer
Exporting normalized counts over final DB windows from csaw
edger chip-seq csaw written 3 months ago by jms12230 • updated 3 months ago by Ryan C. Thompson6.1k
2
votes
1
answer
176
views
1
answer
How to use Diffbind as complete beginner?
diffbind chip-seq written 4 months ago by AA10 • updated 4 months ago by Gord Brown560
0
votes
1
answer
233
views
1
answer
Chip-seq peak annotation [Chipseeker]
annotation chipseeker chip-seq guangchuang written 5 months ago by anupriyaverma14080 • updated 5 months ago by Guangchuang Yu800
0
votes
0
answers
130
views
0
answers
3
votes
1
answer
194
views
1
answer
0
votes
1
answer
274
views
1
answer
0
votes
2
answers
235
views
2
answers
3
votes
1
answer
286
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 10 months ago by siklenkak0 • updated 10 months ago by Aaron Lun17k
2
votes
1
answer
412
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 13 months ago by s14376430 • updated 13 months ago by Aaron Lun17k
0
votes
1
answer
259
views
1
answer
DiffBind: Different results with different chromosome names
diffbind chip-seq written 14 months ago by D.Hemerich0 • updated 14 months ago by Rory Stark2.1k
0
votes
1
answer
294
views
1
answer
Chip-seq analysis with input
chip-seq differential binding analysis written 15 months ago by damian.kao0 • updated 15 months ago by Aaron Lun17k
0
votes
1
answer
266
views
1
answer
DiffBind Analysis with more than 2 samples?
diffbind chip-seq written 15 months ago by sarah.blackstone77340 • updated 15 months ago by Rory Stark2.1k
0
votes
1
answer
300
views
1
answer
Subtracting INPUT reads from ChIP read counts.
diffbind chip-seq written 17 months ago by xie1860 • updated 16 months ago by Rory Stark2.1k
0
votes
2
answers
363
views
2
answers
1
vote
1
answer
689
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 18 months ago by saadmurtazakhan10 • updated 18 months ago by Aaron Lun17k
0
votes
0
answers
327
views
0
answers
2
votes
1
answer
277
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 18 months ago by endrebak8520 • updated 18 months ago by Aaron Lun17k
0
votes
0
answers
411
views
0
answers
0
votes
1
answer
701
views
1
answer
Diffbind plotting on contrasts
diffbind chip-seq written 2.8 years ago by medinaale0 • updated 21 months ago by AB0
0
votes
0
answers
578
views
0
answers
3
votes
6
answers
861
views
6
answers
ChIPQC and broadPeak input
chipseq chipqc chip-seq written 2.2 years ago by lindahove10
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