1
vote
1
answer
148
views
1
answer
0
votes
0
answers
119
views
0
answers
0
votes
2
answers
238
views
2
answers
0
votes
1
answer
122
views
1
answer
1
vote
2
answers
167
views
2
answers
Errors with makeTxDbFromBiomart
chip-seq written 5 months ago by gnani.science0 • updated 5 months ago by Hervé Pagès ♦♦ 13k
0
votes
1
answer
389
views
1
answer
2
votes
1
answer
629
views
1
answer
Exporting normalized counts over final DB windows from csaw
edger chip-seq csaw written 6 months ago by jms12230 • updated 6 months ago by Ryan C. Thompson6.3k
2
votes
1
answer
218
views
1
answer
How to use Diffbind as complete beginner?
diffbind chip-seq written 7 months ago by AA10 • updated 7 months ago by Gord Brown560
0
votes
1
answer
302
views
1
answer
Chip-seq peak annotation [Chipseeker]
annotation chipseeker chip-seq guangchuang written 8 months ago by anupriyaverma14080 • updated 8 months ago by Guangchuang Yu890
0
votes
0
answers
160
views
0
answers
3
votes
1
answer
213
views
1
answer
0
votes
1
answer
325
views
1
answer
0
votes
2
answers
281
views
2
answers
3
votes
1
answer
331
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 13 months ago by siklenkak0 • updated 13 months ago by Aaron Lun18k
2
votes
1
answer
481
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 16 months ago by s14376430 • updated 16 months ago by Aaron Lun18k
0
votes
1
answer
304
views
1
answer
DiffBind: Different results with different chromosome names
diffbind chip-seq written 17 months ago by D.Hemerich0 • updated 17 months ago by Rory Stark2.3k
0
votes
1
answer
353
views
1
answer
Chip-seq analysis with input
chip-seq differential binding analysis written 18 months ago by damian.kao0 • updated 18 months ago by Aaron Lun18k
0
votes
1
answer
331
views
1
answer
DiffBind Analysis with more than 2 samples?
diffbind chip-seq written 19 months ago by sarah.blackstone77340 • updated 19 months ago by Rory Stark2.3k
0
votes
1
answer
333
views
1
answer
Subtracting INPUT reads from ChIP read counts.
diffbind chip-seq written 20 months ago by xie1860 • updated 20 months ago by Rory Stark2.3k
0
votes
2
answers
423
views
2
answers
1
vote
1
answer
813
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 21 months ago by saadmurtazakhan10 • updated 21 months ago by Aaron Lun18k
0
votes
0
answers
379
views
0
answers
2
votes
1
answer
328
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 21 months ago by endrebak8520 • updated 21 months ago by Aaron Lun18k
0
votes
0
answers
440
views
0
answers
0
votes
1
answer
780
views
1
answer
Diffbind plotting on contrasts
diffbind chip-seq written 3.1 years ago by medinaale0 • updated 2.1 years ago by AB0
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