0
votes
1
answer
89
views
1
answer
0
votes
1
answer
45
views
1
answer
1
vote
2
answers
66
views
2
answers
Errors with makeTxDbFromBiomart
chip-seq written 7 days ago by gnani.science0 • updated 6 days ago by Hervé Pagès ♦♦ 12k
0
votes
1
answer
321
views
1
answer
2
votes
1
answer
545
views
1
answer
Exporting normalized counts over final DB windows from csaw
edger chip-seq csaw written 8 weeks ago by jms12230 • updated 8 weeks ago by Ryan C. Thompson5.9k
2
votes
1
answer
137
views
1
answer
How to use Diffbind as complete beginner?
diffbind chip-seq written 10 weeks ago by AA10 • updated 10 weeks ago by Gord Brown510
0
votes
1
answer
171
views
1
answer
Chip-seq peak annotation [Chipseeker]
annotation chipseeker chip-seq guangchuang written 3 months ago by anupriyaverma14080 • updated 3 months ago by Guangchuang Yu700
0
votes
0
answers
111
views
0
answers
3
votes
1
answer
176
views
1
answer
0
votes
1
answer
246
views
1
answer
0
votes
2
answers
215
views
2
answers
3
votes
1
answer
251
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 8 months ago by siklenkak0 • updated 8 months ago by Aaron Lun16k
2
votes
1
answer
367
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 11 months ago by s14376430 • updated 11 months ago by Aaron Lun16k
0
votes
1
answer
234
views
1
answer
DiffBind: Different results with different chromosome names
diffbind chip-seq written 12 months ago by D.Hemerich0 • updated 12 months ago by Rory Stark2.0k
0
votes
1
answer
266
views
1
answer
Chip-seq analysis with input
chip-seq differential binding analysis written 13 months ago by damian.kao0 • updated 13 months ago by Aaron Lun16k
0
votes
1
answer
238
views
1
answer
DiffBind Analysis with more than 2 samples?
diffbind chip-seq written 14 months ago by sarah.blackstone77340 • updated 13 months ago by Rory Stark2.0k
0
votes
1
answer
271
views
1
answer
Subtracting INPUT reads from ChIP read counts.
diffbind chip-seq written 15 months ago by xie1860 • updated 14 months ago by Rory Stark2.0k
0
votes
2
answers
327
views
2
answers
1
vote
1
answer
624
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 16 months ago by saadmurtazakhan10 • updated 16 months ago by Aaron Lun16k
0
votes
0
answers
301
views
0
answers
2
votes
1
answer
258
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 16 months ago by endrebak8520 • updated 16 months ago by Aaron Lun16k
0
votes
0
answers
383
views
0
answers
0
votes
1
answer
646
views
1
answer
Diffbind plotting on contrasts
diffbind chip-seq written 2.7 years ago by medinaale0 • updated 19 months ago by AB0
0
votes
0
answers
520
views
0
answers
3
votes
6
answers
829
views
6
answers
ChIPQC and broadPeak input
chipseq chipqc chip-seq written 2.1 years ago by lindahove10
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