3
votes
1
answer
130
views
1
answer
0
votes
1
answer
166
views
1
answer
0
votes
2
answers
160
views
2
answers
3
votes
1
answer
173
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 4 months ago by siklenkak0 • updated 4 months ago by Aaron Lun14k
2
votes
1
answer
258
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 7 months ago by s14376430 • updated 7 months ago by Aaron Lun14k
0
votes
1
answer
178
views
1
answer
DiffBind: Different results with different chromosome names
diffbind chip-seq written 8 months ago by D.Hemerich0 • updated 8 months ago by Rory Stark1.7k
0
votes
1
answer
195
views
1
answer
Chip-seq analysis with input
chip-seq differential binding analysis written 9 months ago by damian.kao0 • updated 9 months ago by Aaron Lun14k
0
votes
1
answer
181
views
1
answer
DiffBind Analysis with more than 2 samples?
diffbind chip-seq written 9 months ago by sarah.blackstone77340 • updated 9 months ago by Rory Stark1.7k
0
votes
1
answer
217
views
1
answer
Subtracting INPUT reads from ChIP read counts.
diffbind chip-seq written 10 months ago by xie186bioinforcore0 • updated 10 months ago by Rory Stark1.7k
0
votes
2
answers
238
views
2
answers
1
vote
1
answer
482
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 12 months ago by saadmurtazakhan10 • updated 12 months ago by Aaron Lun14k
0
votes
0
answers
240
views
0
answers
2
votes
1
answer
189
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 12 months ago by endrebak8510 • updated 12 months ago by Aaron Lun14k
0
votes
0
answers
309
views
0
answers
0
votes
1
answer
544
views
1
answer
Diffbind plotting on contrasts
diffbind chip-seq written 2.3 years ago by medinaale0 • updated 15 months ago by AB0
0
votes
0
answers
412
views
0
answers
3
votes
6
answers
703
views
6
answers
ChIPQC and broadPeak input
chipseq chipqc chip-seq written 20 months ago by lindahove10
0
votes
0
answers
410
views
0
answers
3
votes
1
answer
462
views
1
answer
Strand-aware CSAW analysis
chip-seq csaw clip-seq written 2.3 years ago by IV20
2
votes
1
answer
465
views
1
answer
problem with characters in chromosome names in DiffBind dba
diffbind chip-seq written 2.5 years ago by Georg Otto110 • updated 2.5 years ago by Rory Stark1.7k
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