3
votes
1
answer
94
views
1
answer
0
votes
1
answer
123
views
1
answer
0
votes
2
answers
126
views
2
answers
3
votes
1
answer
125
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 10 weeks ago by siklenkak0 • updated 10 weeks ago by Aaron Lun14k
2
votes
1
answer
200
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 5 months ago by s14376430 • updated 5 months ago by Aaron Lun14k
0
votes
1
answer
147
views
1
answer
DiffBind: Different results with different chromosome names
diffbind chip-seq written 6 months ago by D.Hemerich0 • updated 6 months ago by Rory Stark1.7k
0
votes
1
answer
164
views
1
answer
Chip-seq analysis with input
chip-seq differential binding analysis written 7 months ago by damian.kao0 • updated 7 months ago by Aaron Lun14k
0
votes
1
answer
143
views
1
answer
DiffBind Analysis with more than 2 samples?
diffbind chip-seq written 7 months ago by sarah.blackstone77340 • updated 7 months ago by Rory Stark1.7k
0
votes
1
answer
187
views
1
answer
Subtracting INPUT reads from ChIP read counts.
diffbind chip-seq written 9 months ago by xie186bioinforcore0 • updated 8 months ago by Rory Stark1.7k
0
votes
2
answers
201
views
2
answers
1
vote
1
answer
398
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 10 months ago by saadmurtazakhan10 • updated 10 months ago by Aaron Lun14k
0
votes
0
answers
216
views
0
answers
2
votes
1
answer
160
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 10 months ago by endrebak8510 • updated 10 months ago by Aaron Lun14k
0
votes
0
answers
281
views
0
answers
0
votes
1
answer
502
views
1
answer
Diffbind plotting on contrasts
diffbind chip-seq written 2.2 years ago by medinaale0 • updated 13 months ago by AB0
0
votes
0
answers
358
views
0
answers
3
votes
6
answers
592
views
6
answers
ChIPQC and broadPeak input
chipseq chipqc chip-seq written 18 months ago by lindahove10
0
votes
0
answers
376
views
0
answers
3
votes
1
answer
430
views
1
answer
Strand-aware CSAW analysis
chip-seq csaw clip-seq written 2.1 years ago by IV20
2
votes
1
answer
434
views
1
answer
problem with characters in chromosome names in DiffBind dba
diffbind chip-seq written 2.3 years ago by Georg Otto110 • updated 2.3 years ago by Rory Stark1.7k
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