Showing: chip-seqreset
4
votes
1
answer
800
views
1
answer
Strand-aware CSAW analysis
chip-seq csaw clip-seq written 4.8 years ago by IV30
2
votes
1
answer
489
views
1
answer
How to use Diffbind as complete beginner?
diffbind chip-seq written 2.4 years ago by AA10 • updated 2.3 years ago by Gord Brown590
1
vote
1
answer
232
views
1
answer
2
votes
1
answer
765
views
1
answer
problem with characters in chromosome names in DiffBind dba
diffbind chip-seq written 5.0 years ago by Georg Otto120 • updated 5.0 years ago by Rory Stark2.9k
0
votes
1
answer
1.2k
views
1
answer
Diffbind plotting on contrasts
diffbind chip-seq written 4.8 years ago by medinaale0 • updated 3.8 years ago by AB70
0
votes
0
answers
769
views
0
answers
3
votes
6
answers
1.4k
views
6
answers
ChIPQC and broadPeak input
chipseq chipqc chip-seq written 4.2 years ago by lindahove10
0
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0
answers
1.1k
views
0
answers
0
votes
0
answers
645
views
0
answers
2
votes
1
answer
518
views
1
answer
How does csaw handle multiply aligned reads?
chip-seq csaw written 3.5 years ago by endrebak8530 • updated 3.5 years ago by Aaron Lun25k
0
votes
0
answers
558
views
0
answers
1
vote
1
answer
1.5k
views
1
answer
Normalization of chip-seq data in manually specified regions using CSAW
chip-seq csaw tmm tss written 3.5 years ago by saadmurtazakhan10 • updated 3.5 years ago by Aaron Lun25k
0
votes
2
answers
922
views
2
answers
0
votes
1
answer
614
views
1
answer
Subtracting INPUT reads from ChIP read counts.
diffbind chip-seq written 3.4 years ago by xie1860 • updated 3.4 years ago by Rory Stark2.9k
0
votes
1
answer
2.0k
views
1
answer
DiffBind Analysis with more than 2 samples?
diffbind chip-seq written 3.3 years ago by sarah.blackstone77340 • updated 3.3 years ago by Rory Stark2.9k
0
votes
1
answer
624
views
1
answer
Chip-seq analysis with input
chip-seq differential binding analysis written 3.3 years ago by damian.kao0 • updated 3.3 years ago by Aaron Lun25k
0
votes
1
answer
534
views
1
answer
DiffBind: Different results with different chromosome names
diffbind chip-seq written 3.2 years ago by D.Hemerich0 • updated 3.2 years ago by Rory Stark2.9k
2
votes
1
answer
999
views
1
answer
Removing GC content bias and trended bias from ChIP-seq data
normalization edger cqn chip-seq csaw written 3.1 years ago by s14376430 • updated 3.1 years ago by Aaron Lun25k
3
votes
1
answer
719
views
1
answer
Interpretation of cross correlation plot to determine fragment length
chip-seq csaw histone written 2.9 years ago by siklenkak0 • updated 2.9 years ago by Aaron Lun25k
0
votes
2
answers
642
views
2
answers
0
votes
1
answer
749
views
1
answer
3
votes
1
answer
392
views
1
answer
0
votes
0
answers
421
views
0
answers
0
votes
1
answer
661
views
1
answer
Chip-seq peak annotation [Chipseeker]
annotation chipseeker chip-seq guangchuang written 2.4 years ago by anupriyaverma14080 • updated 2.4 years ago by Guangchuang Yu1.1k
0
votes
1
answer
664
views
1
answer
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