Showing: chipqcreset
3
votes
9
answers
1.6k
views
9
answers
ChIPQC failling when run ChIPQC() over 6 samples
chipqc written 4.2 years ago by atisou0 • updated 21 months ago by Thomas Carroll400
3
votes
6
answers
1.3k
views
6
answers
ChIPQC and broadPeak input
chipseq chipqc chip-seq written 3.7 years ago by lindahove10
5
votes
6
answers
537
views
6
answers
ChIPQC Error in .Call2 NCList object is too deep
chipqc written 18 months ago by Victor Goitea10 • updated 18 months ago by Thomas Carroll400
4
votes
4
answers
1.2k
views
4
answers
ChIPQC v1.4 fails uninformatively where version 1.2 works fine
chipqc written 4.1 years ago by liz.ingsimmons120 • updated 3.9 years ago by Rory Stark2.8k
4
votes
3
answers
1.1k
views
3
answers
0
votes
3
answers
499
views
3
answers
Problems with double read counts on ChIPQC
chipqc written 2.7 years ago by cattapre0 • updated 2.7 years ago by rsuarez0
2
votes
3
answers
503
views
3
answers
Error involving ChIPQCreport
chipqc written 2.2 years ago by Roger0 • updated 2.1 years ago by Thomas Carroll400
0
votes
3
answers
593
views
3
answers
0
votes
2
answers
797
views
2
answers
ChiPQC and paired-end data
chipqc written 4.9 years ago by Ugo Borello340 • updated 4.8 years ago by Carroll, Thomas20
1
vote
2
answers
6.0k
views
2
answers
3
votes
2
answers
539
views
2
answers
ChIPQC on samples without peaks and wrong total reads
chipqc written 2.7 years ago by Amitha Sampath10 • updated 2.7 years ago by Thomas Carroll400
4
votes
2
answers
489
views
2
answers
ChIPQC : ChIPQCreport(experiment) swap memory overload
chipqc chipqcreport written 24 months ago by ZheFrench10 • updated 24 months ago by Thomas Carroll400
1
vote
2
answers
315
views
2
answers
ChIPQC installation does not force latest DiffBind version
diffbind chipqc chipqcreport written 23 months ago by Coby Viner50 • updated 23 months ago by Thomas Carroll400
0
votes
2
answers
462
views
2
answers
ChIPQC reading more samples that it should
chipqc written 23 months ago by C T90
2
votes
2
answers
839
views
2
answers
Diffbind: dba.plot retrieve variance explained
diffbind chipqc written 21 months ago by ZheFrench10 • updated 20 months ago by Rory Stark2.8k
2
votes
2
answers
444
views
5 follow
2
answers
ChIPQC: error during annotation compilation
chipqc written 8 months ago by hdingwall10 • updated 8 months ago by Thomas Carroll400
0
votes
1
answer
1.4k
views
1
answer
1
vote
1
answer
1.2k
views
1
answer
ChIPQC: reads counts in bam do not match ones from samtools flagstat
chipqc written 4.2 years ago by atisou0 • updated 4.2 years ago by Thomas Carroll400
3
votes
1
answer
1.1k
views
1
answer
creating custom genome annotation for the ChIPQC package
chipseq chipqc qc written 3.8 years ago by Philip Lijnzaad160 • updated 3.8 years ago by Thomas Carroll400
4
votes
1
answer
965
views
1
answer
Confusing error when running ChIPQC
chipseq chipqc written 3.6 years ago by Ryan C. Thompson7.3k • updated 3.6 years ago by Thomas Carroll400
3
votes
1
answer
503
views
1
answer
shiftApply verbosity (in ChIPQC)
chipqc s4vectors written 3.2 years ago by liz.ingsimmons120 • updated 3.0 years ago by Thomas Carroll400
0
votes
1
answer
1.2k
views
1
answer
0
votes
1
answer
821
views
1
answer
1
vote
1
answer
708
views
1
answer
ChIPQC error: Error in generating sample data
chipqc written 3.0 years ago by meeta.mistry20 • updated 3.0 years ago by Rory Stark2.8k
3
votes
1
answer
816
views
1
answer
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