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Chip-seq peak annotation [Chipseeker]
annotation chipseeker chip-seq guangchuang written 2.5 years ago by anupriyaverma1408 • 0 • updated 2.5 years ago by Guangchuang Yu • 1.1k
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ChIPseeker mapping between keys and columns
chipseq chipseeker written 2.2 years ago by rbronste • 60 • updated 2.2 years ago by Gavin Kelly • 570
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Assigning stats to differential peak locations relative to TSS
chipseq chipseeker statistics written 2.2 years ago by rbronste • 60
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424
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chipseeker annotation of focused genic regions
chipseeker annotatepeak written 2.1 years ago by wuzefeng2008 • 0 • updated 2.1 years ago by Guangchuang Yu • 1.1k
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ChIPseeker peak annotation tssRegion
chipseq annotation chipseeker written 2.1 years ago by lifeng.liu.biology • 10
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Removing/combining specific annotation categories in ChIPSeeker plots/analysis
chipseq annotation chipseeker written 2.1 years ago by rbronste • 60
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how to define the downstream range in ChIPseeker
chipseq chipseeker h3k27me3 written 2.1 years ago by lifeng.liu.biology • 10 • updated 2.1 years ago by Guangchuang Yu • 1.1k
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Intergenic assigned to genes by ChIPseeker
chipseeker txdb.mmusculus.ucsc.mm10.knowngene written 24 months ago by doan.dinh • 0
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ChIPSeeker enrichPeakOverlap external dataset downloads
chipseq chipseeker chip written 23 months ago by rbronste • 60 • updated 23 months ago by Guangchuang Yu • 1.1k
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custom annotation in annotatePeak
chipseeker guangchuang yu written 23 months ago by andrew.gehrke • 0
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custom background list for ReactomePA
chipseeker reactomepa guangchuang yu written 23 months ago by andrew.gehrke • 0
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problem on getpromoters on hg38
chipseeker written 22 months ago by jarod_v6@libero.it • 40
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"input object should be a named list" error in ChIPseeker
chipseeker vennplot named list error plotannobar plotdisttotss written 21 months ago by k.panov • 0 • updated 21 months ago by Guangchuang Yu • 1.1k
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Error in getGenomicAnnoStat(peak.gr) : object 'plab' not found
chipseeker written 20 months ago by chenkehua4803 • 0 • updated 20 months ago by Guangchuang Yu • 1.1k
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How does vennplot() within Chipseeker define overlaps?
chipseeker vennplot written 18 months ago by kevin.potter12 • 0
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Error: package or namespace load failed for 'ChIPseeker' in dyn.load(file, DLLpath = DLLpath
chipseeker written 17 months ago by liucz200904 • 0
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ChIP peak annotation: how to get all genes that overlap each peak?
chippeakanno chipseeker chip-seq written 17 months ago by 94133 • 0
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How to do functional enrichment analysis for only promoter regions using ChIPseeker
chipseq chipseeker written 16 months ago by shikhtechai • 0 • updated 15 months ago by Guangchuang Yu • 1.1k
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How to get the genome distribution in proportion of promoter, 1st exon, other exon, 1st intron, other intron, distal intergenic, etc from a species
chipseeker written 16 months ago by bright602 • 0
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ChIPseeker/Question about ''annoatePeak' function and for Bioconductor AnnotationData Packages for L.japonicus
chipseq chipseeker bioconductor annotationdata packages lotus japonicus written 14 months ago by egbastakis • 0 • updated 14 months ago by James W. MacDonald ♦ 52k
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covplot and getChrCov function
chipseeker written 14 months ago by xiaofeiwang198266 • 0
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303
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ChipSeeker Flanking gene annotation
chipseeker written 14 months ago by Lauma R • 0
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how to get frequencies from plotDistToTSS
chipseeker written 12 months ago by KKO • 0
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How to use ChIPseeker for getting genebody annotations.
chipseq chipseeker written 11 months ago by shikhtechai • 0
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ChIPseeker genomicAnnotationPriority
annotation chipseeker written 11 months ago by dolata • 0
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