0
votes
1
answer
88
views
1
answer
MAnorm output as DiffBind input.
chipseq normalization diffbind manorm written 4 weeks ago by ajeet0 • updated 27 days ago by Rory Stark2.3k
2
votes
1
answer
114
views
1
answer
1
vote
1
answer
67
views
1
answer
Filtering a BED file according to genomic annotation
chipseq filtering bedtools bed files written 6 weeks ago by rbronste50 • updated 6 weeks ago by Aaron Lun18k
5
votes
1
answer
220
views
1
answer
ChIPSeeker enrichPeakOverlap external dataset downloads
chipseq chipseeker chip written 8 weeks ago by rbronste50 • updated 7 weeks ago by Guangchuang Yu890
4
votes
2
answers
164
views
2
answers
0
votes
0
answers
141
views
0
answers
3
votes
2
answers
191
views
2
answers
dba.count with pre-defined regions
chipseq diffbind dba.count dba written 10 weeks ago by sylvia10 • updated 10 weeks ago by Rory Stark2.3k
2
votes
6
answers
186
views
6
answers
0
votes
1
answer
190
views
1
answer
how to define the downstream range in ChIPseeker
chipseq chipseeker h3k27me3 written 3 months ago by lifeng.liu.biology10 • updated 3 months ago by Guangchuang Yu890
2
votes
1
answer
140
views
1
answer
0
votes
0
answers
162
views
0
answers
2
votes
2
answers
213
views
2
answers
2
votes
1
answer
159
views
1
answer
complex design for chip-seq analysis
chipseq limma multiple factor design design matrix csaw written 4 months ago by Assa Yeroslaviz1.3k • updated 4 months ago by Aaron Lun18k
0
votes
1
answer
130
views
1
answer
Pseudo-coloring DiffBind volcano plot
chipseq diffbind volcanoplot ggplot2 written 4 months ago by rbronste50 • updated 4 months ago by Rory Stark2.3k
1
vote
1
answer
145
views
1
answer
DiffBind error: diffbind DESeq2 analysis has not been run for this contrast
chipseq diffbind R written 4 months ago by kyliecode0 • updated 4 months ago by Rory Stark2.3k
0
votes
0
answers
180
views
0
answers
2
votes
1
answer
187
views
1
answer
ChIPseeker mapping between keys and columns
chipseq chipseeker written 4 months ago by rbronste50 • updated 4 months ago by Gavin Kelly550
1
vote
1
answer
299
views
1
answer
DiffBind broad and narrow peak identification
chipseq diffbind R written 5 months ago by reubenmcgregor880 • updated 5 months ago by Rory Stark2.3k
2
votes
2
answers
299
views
2
answers
MA plot DiffBind in ggplot2
chipseq diffbind R ggplot2 written 5 months ago by reubenmcgregor880 • updated 5 months ago by Rory Stark2.3k
1
vote
1
answer
203
views
1
answer
Diffbind Consensus vs Differential peak sets from same count
chipseq diffbind written 5 months ago by rbronste50 • updated 5 months ago by Rory Stark2.3k
0
votes
0
answers
138
views
0
answers
2
votes
1
answer
332
views
1
answer
DiffBind consensus peak help
chipseq diffbind R written 5 months ago by reubenmcgregor880 • updated 5 months ago by Rory Stark2.3k
1
vote
1
answer
380
views
1
answer
DiffBind masks for counts
chipseq diffbind written 6 months ago by rbronste50 • updated 5 months ago by Rory Stark2.3k
2
votes
1
answer
411
views
1
answer
DiffBind contrasts issue
chipseq diffbind written 6 months ago by rbronste50 • updated 5 months ago by Rory Stark2.3k
5
votes
1
answer
293
views
1
answer
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