0
votes
1
answer
97
views
1
answer
how to define the downstream range in ChIPseeker
chipseq chipseeker h3k27me3 written 2 days ago by lifeng.liu.biology10 • updated 2 days ago by Guangchuang Yu800
2
votes
1
answer
82
views
1
answer
0
votes
0
answers
100
views
0
answers
2
votes
2
answers
128
views
2
answers
2
votes
1
answer
106
views
1
answer
complex design for chip-seq analysis
chipseq limma multiple factor design design matrix csaw written 27 days ago by Assa Yeroslaviz1.3k • updated 27 days ago by Aaron Lun17k
0
votes
1
answer
79
views
1
answer
Pseudo-coloring DiffBind volcano plot
chipseq diffbind volcanoplot ggplot2 written 6 weeks ago by rbronste20 • updated 5 weeks ago by Rory Stark2.1k
1
vote
1
answer
96
views
1
answer
0
votes
0
answers
120
views
0
answers
2
votes
1
answer
139
views
1
answer
ChIPseeker mapping between keys and columns
chipseq chipseeker written 7 weeks ago by rbronste20 • updated 7 weeks ago by Gavin Kelly510
1
vote
1
answer
227
views
1
answer
DiffBind broad and narrow peak identification
chipseq diffbind R written 10 weeks ago by reubenmcgregor880 • updated 8 weeks ago by Rory Stark2.1k
2
votes
2
answers
229
views
2
answers
MA plot DiffBind in ggplot2
chipseq diffbind R ggplot2 written 10 weeks ago by reubenmcgregor880 • updated 8 weeks ago by Rory Stark2.1k
1
vote
1
answer
157
views
1
answer
Diffbind Consensus vs Differential peak sets from same count
chipseq diffbind written 9 weeks ago by rbronste20 • updated 8 weeks ago by Rory Stark2.1k
0
votes
0
answers
88
views
0
answers
2
votes
1
answer
285
views
1
answer
DiffBind consensus peak help
chipseq diffbind R written 10 weeks ago by reubenmcgregor880 • updated 10 weeks ago by Rory Stark2.1k
1
vote
1
answer
342
views
1
answer
DiffBind masks for counts
chipseq diffbind written 12 weeks ago by rbronste20 • updated 11 weeks ago by Rory Stark2.1k
2
votes
1
answer
371
views
1
answer
DiffBind contrasts issue
chipseq diffbind written 12 weeks ago by rbronste20 • updated 11 weeks ago by Rory Stark2.1k
5
votes
1
answer
212
views
1
answer
18
votes
4
answers
4.7k
views
4
answers
DESeq2 for ChIP-seq differential peaks
chipseq deseq deseq2 written 2.2 years ago by tangming200590 • updated 4 months ago by k.vitting.seerup10
0
votes
1
answer
109
views
1
answer
How to set the amount of RAM used for Package 'BCRANK' ?
chipseq bcrank written 4 months ago by rezapanahi2220 • updated 4 months ago by James W. MacDonald45k
0
votes
0
answers
148
views
0
answers
2
votes
3
answers
209
views
3
answers
1
vote
2
answers
351
views
2
answers
loading dba.plotVolcano in DiffBind
chipseq diffbind atac-seq rory stark written 7 months ago by andrew.gehrke0 • updated 7 months ago by Rory Stark2.1k
1
vote
2
answers
413
views
2
answers
3
votes
1
answer
326
views
1
answer
Differential Pol2 pausing analysis
chipseq edger csaw differential binding analysis written 9 months ago by dalerr0 • updated 9 months ago by Aaron Lun17k
3
votes
1
answer
268
views
1
answer
Use csaw to build matrix for heatmap?
chipseq edger csaw written 9 months ago by jmKeith0 • updated 9 months ago by Aaron Lun17k
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