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903
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"Some normalization factors are zero" error on cn.mops
cn.mops written 4.4 years ago by Stephen Piccolo • 560 • updated 4.4 years ago by Günter Klambauer • 540
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576
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Unpaired CNV Exome
cn.mops written 4.4 years ago by nikhilgadewal • 0 • updated 4.4 years ago by Günter Klambauer • 540
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840
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Using cn.MOPs to estimate CNVs in tumors without reference normal
cnvtools cn.mops tcga cnv written 4.1 years ago by vakul.mohanty • 10 • updated 4.1 years ago by Günter Klambauer • 540
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909
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refSeqName issue in cn.MOPS
cn.mops cnv written 3.9 years ago by ashkot09 • 0 • updated 3.9 years ago by Günter Klambauer • 540
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cn.MOPS output file
cn.mops written 3.9 years ago by ashkot09 • 0 • updated 3.9 years ago by Günter Klambauer • 540
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805
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Detect CNVs in target sample
cn.mops cnv written 3.9 years ago by ashkot09 • 0 • updated 3.9 years ago by Günter Klambauer • 540
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515
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problems on the CNV detection by cn.mops using multiply WGS data
cn.mops written 3.5 years ago by flzh628 • 0 • updated 3.5 years ago by Günter Klambauer • 540
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390
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why there are multiple calls to cnmops C function?
cn.mops written 3.4 years ago by Mohammad Alkhamis • 0 • updated 3.4 years ago by Günter Klambauer • 540
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445
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Suggestion: type of ExpLogFoldChange (sini)
cn.mops written 3.2 years ago by Mohammad Alkhamis • 0 • updated 3.2 years ago by Günter Klambauer • 540
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506
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about cn.MOPS: paired vs unpaired
cn.mops written 3.1 years ago by Bogdan • 580 • updated 3.1 years ago by Günter Klambauer • 540
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557
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cn.mops: NA in the output of referencecn.mops
cn.mops referencecn.mops written 3.1 years ago by Radek • 60 • updated 3.1 years ago by Günter Klambauer • 540
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Input (X) data type is not numeric if read from GRanges obj
cn.mops written 3.0 years ago by Mohammad Alkhamis • 0 • updated 3.0 years ago by Günter Klambauer • 540
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How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
cn.mops cnv targeted sequencing written 2.9 years ago by Bouzid.a • 0 • updated 2.9 years ago by Günter Klambauer • 540
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538
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Call CNV in population with large depth variance
cn.mops written 2.9 years ago by Xiao Zhang • 0 • updated 2.9 years ago by Günter Klambauer • 540
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631
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R code for cn.mops
cn.mops written 2.8 years ago by Bogdan • 580 • updated 2.6 years ago by Günter Klambauer • 540
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R code for cn.mops -- if a chromosome does not have CNV ?
cn.mops referencecn.mops written 2.8 years ago by Bogdan • 580 • updated 2.6 years ago by Günter Klambauer • 540
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452
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cn.mops returning only "NA" as copy number
cn.mops written 2.8 years ago by rc16955 • 0 • updated 2.8 years ago by Günter Klambauer • 540
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427
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which cn.mops function should I use
cn.mops written 2.6 years ago by thestaroceanster • 0 • updated 2.6 years ago by Günter Klambauer • 540
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609
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Conflict in cnvr and cnvs result from cn.mops
cn.mops written 2.6 years ago by thestaroceanster • 0 • updated 2.5 years ago by Günter Klambauer • 540
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533
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How to combine CNVDetectionResult objects in cn.mops package
cn.mops written 2.5 years ago by Haiying.Kong • 110 • updated 2.5 years ago by Günter Klambauer • 540
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392
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getReadCountsFromBAM including bed information
cn.mops bed files getreadcountsfrombam written 2.4 years ago by Pau Marc Muñoz Torres • 20
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cn.MOPS - reporting log normalized read counts as table
cn.mops log table normalized counts written 2.4 years ago by falk.zakrzewski • 0 • updated 2.4 years ago by Günter Klambauer • 540
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Is cn.mops can be used for detecting CNV for targeted sequencing of 8M region
cn.mops written 2.0 years ago by iszhucy • 0 • updated 2.0 years ago by Günter Klambauer • 540
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508
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cn.MOPs issue with "Error in if (all(segMedianT == 0))"
cn.mops cnv written 2.0 years ago by martyferr90 • 20 • updated 24 months ago by Günter Klambauer • 540
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Error when use getSegmentReadCountsFromBAM
cn.mops targeted sequencing written 22 months ago by jinxinhao1988 • 0
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