Showing: cnv • reset
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Error using singlecn.mops for cnv detection in WGS data
cn.mops cnv singlecn.mops written 28 days ago by frez111 • 0 • updated 28 days ago by Martin Morgan ♦♦ 24k
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CNV in Normal Samples?
cnv purecn germline normal written 14 months ago by twtoal • 0 • updated 14 months ago by markus.riester • 110
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Gaia not returning results - load_cnv problem
gaia cnv written 16 months ago by rina • 0 • updated 16 months ago by Sandro Morganella • 30
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Error: vector memory exhausted (limit reached?)
gaia tcga cnv mac os x tcgabiolinks written 16 months ago by rina • 0 • updated 16 months ago by rreck • 20
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340
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Doubt about WL in cn.mops
dnaseq dnacopy cn.mops cnv genomic written 17 months ago by cased • 0 • updated 17 months ago by Günter Klambauer • 540
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Noise Analyses of CNV Data from TCGA
tcga cnv tcgabiolinks noise pruning written 17 months ago by jrlarsen • 10
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Does Greater Depth Allow Low Purity To Work Well?
cnv purecn purity low purity written 18 months ago by twtoal • 0
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counting the sequencing reads in 10kb regions on a genome-wide scale
rsamtools cnv read counting written 21 months ago by Bogdan • 580 • updated 21 months ago by James W. MacDonald ♦ 52k
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how to analyze "Beta-score" and get CNVdata using Comunee
cnv 450k conumee written 22 months ago by bird.of.clockwise • 0
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visualize CNV data based on WGS
cnv written 22 months ago by Bogdan • 580
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exomeCopy error with compileCopyCountSegments
exomecopy cnv written 23 months ago by ramakrishnas • 0
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cn.MOPs issue with "Error in if (all(segMedianT == 0))"
cn.mops cnv written 24 months ago by martyferr90 • 20 • updated 23 months ago by Günter Klambauer • 540
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detecting of CNV in WGS/WES data
cnv wes wgs written 2.4 years ago by Bogdan • 580 • updated 2.4 years ago by Haiying.Kong • 110
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Filter CNVs if contain certain gene
cnv cnvs genomic ranges written 2.4 years ago by julrodr80 • 30
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list fo genes by cnv
cnv genes genomic ranges splitbyoverlap written 2.7 years ago by julrodr80 • 30 • updated 2.7 years ago by Martin Morgan ♦♦ 24k
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DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
preprocessing minfi cnv dna methylation written 2.7 years ago by Thomas • 0
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How to use cn.mops to detect CNVs from Targeted DNA Sequencing data?
cn.mops cnv targeted sequencing written 2.9 years ago by amalbouzid.ing • 0 • updated 2.9 years ago by Günter Klambauer • 540
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580
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CNV caller software
cnv written 3.2 years ago by Bogdan • 580
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Union of GenomicRanges problem when one range is empty
genomicranges R cnv written 3.3 years ago by WouterDeCoster • 110
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crlmm: Does it support Illumina BeadChip platform HumanCore-24v1-0_A
crlmm cnvtools cnv written 3.3 years ago by enriquev • 0
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570
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CopywriteR: CNV calling on normals samples / gaps in chromosomes
cnvtools copynumber cnv copywriter written 3.4 years ago by ahinsahr11 • 0 • updated 3.4 years ago by t.kuilman ♦ 140
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ExomeDepth Package Error Messages
cnv exome written 3.8 years ago by Bio152 • 150
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Is there any way of exporting CNV data from Affymetrix SNP 6.0 arrays from Nexus Software for OncoScan?
cnv nexus for oncoscan affymetrix 6.0 .bgr written 3.8 years ago by IOM • 20
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798
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Detect CNVs in target sample
cn.mops cnv written 3.9 years ago by ashkot09 • 0 • updated 3.9 years ago by Günter Klambauer • 540
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refSeqName issue in cn.MOPS
cn.mops cnv written 3.9 years ago by ashkot09 • 0 • updated 3.9 years ago by Günter Klambauer • 540
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