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0
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57
views
0
answers
0
votes
1
answer
83
views
1
answer
2
votes
3
answers
96
views
3
answers
0
votes
1
answer
138
views
1
answer
RNA-Seq Batch correction negative values
sva combat rna-seq scran batch-effect written 7 weeks ago by rmf0 • updated 7 weeks ago by Aaron Lun17k
1
vote
1
answer
517
views
1
answer
0
votes
0
answers
514
views
0
answers
0
votes
1
answer
261
views
1
answer
DESeq2, outlier correction, Combat, NMF
deseq2 combat outliers nmf written 5 months ago by noname0 • updated 5 months ago by Michael Love15k
0
votes
0
answers
254
views
0
answers
1
vote
1
answer
146
views
1
answer
How to interpret the SVA results
sva combat rna-seq written 7 months ago by xie1860 • updated 7 months ago by James W. MacDonald45k
4
votes
1
answer
249
views
1
answer
Adjust for multiple batches using combat
limma sva combat written 8 months ago by juls0 • updated 8 months ago by Aaron Lun17k
3
votes
1
answer
407
views
1
answer
How to normalize chromatin and RNA-Seq data together ?
sva deseq2 combat atac atac-seq written 9 months ago by g.atla0 • updated 8 months ago by Michael Love15k
0
votes
0
answers
213
views
0
answers
0
votes
1
answer
225
views
1
answer
0
votes
1
answer
793
views
1
answer
ComBat to remove batch effects from RNA Seq data
rnaseq combat written 13 months ago by kerrypop0 • updated 13 months ago by polemiraza40
2
votes
3
answers
460
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3
answers
3
votes
3
answers
449
views
3
answers
9
votes
2
answers
657
views
2
answers
voom with combat
limma combat voom batch effect written 16 months ago by eldronzhou10 • updated 16 months ago by Gordon Smyth32k
0
votes
1
answer
259
views
1
answer
8
votes
3
answers
4.2k
views
7 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 23 months ago by AB0 • updated 17 months ago by adam0
2
votes
1
answer
334
views
1
answer
comBat/SVA with no "variable of interest" and two batches
sva combat covariates written 19 months ago by TP0 • updated 18 months ago by chris86330
0
votes
0
answers
247
views
0
answers
5
votes
1
answer
673
views
1
answer
10
votes
2
answers
912
views
2
answers
Method for batch correction
limma sva combat written 19 months ago by AST50 • updated 19 months ago by Vegard Nygaard100
0
votes
0
answers
260
views
0
answers
1
vote
1
answer
506
views
1
answer
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