2
votes
1
answer
96
views
1
answer
0
votes
2
answers
194
views
2
answers
Time points and donors - errors with contrasts
deseq2 contrast written 5 months ago by sasha0 • updated 24 days ago by Michael Love15k
0
votes
1
answer
89
views
1
answer
Discrepancy in extracting contrasts
deseq2 contrast batch effect resultsnames written 9 weeks ago by pkachroo10 • updated 9 weeks ago by Michael Love15k
2
votes
1
answer
424
views
1
answer
0
votes
1
answer
407
views
1
answer
DESEq2 contrast statement syntax and design statement question
deseq2 interactions contrast written 4 months ago by grashow0 • updated 4 months ago by Michael Love15k
5
votes
1
answer
889
views
1
answer
DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 contrast lfc coef written 4 months ago by Anke Busch0 • updated 4 months ago by Michael Love15k
2
votes
1
answer
182
views
1
answer
EdgeR -ANOVA-like test vs testing individual contrasts
edger anova contrast t-test written 5 months ago by Maiv0 • updated 5 months ago by Aaron Lun17k
0
votes
1
answer
276
views
1
answer
0
votes
1
answer
255
views
1
answer
how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 7 months ago by aec30 • updated 7 months ago by Michael Love15k
0
votes
2
answers
321
views
2
answers
3
votes
2
answers
340
views
2
answers
0
votes
1
answer
285
views
1
answer
intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 9 months ago by prppmet0 • updated 9 months ago by Michael Love15k
2
votes
2
answers
346
views
2
answers
2
votes
1
answer
211
views
1
answer
0
votes
1
answer
251
views
1
answer
edgeR constrast drug treatments and time points
edger contrast written 13 months ago by sergio.martinezcuesta10 • updated 13 months ago by Aaron Lun17k
0
votes
1
answer
353
views
1
answer
limma camera function Multiple contrasts
microarray limma camera contrast written 14 months ago by gaby86380 • updated 14 months ago by Gordon Smyth32k
2
votes
1
answer
339
views
1
answer
1
vote
1
answer
302
views
1
answer
Are these contrasts correct for use in DESeq2?
deseq2 contrast written 19 months ago by Jane Merlevede90 • updated 19 months ago by Michael Love15k
2
votes
2
answers
492
views
2
answers
2
votes
1
answer
401
views
1
answer
2
votes
2
answers
890
views
2
answers
0
votes
3
answers
1.0k
views
3
answers
4
votes
1
answer
527
views
1
answer
4
votes
2
answers
445
views
2
answers
1
vote
2
answers
419
views
2
answers
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