2
votes
1
answer
61
views
1
answer
2
votes
1
answer
178
views
1
answer
Multi-factor analysis Deseq2
deseq2 contrast ltr written 5 weeks ago by Ir5sE0 • updated 5 weeks ago by Michael Love20k
0
votes
1
answer
174
views
1
answer
RNA-seq time course experiment - DESEq2 Contrasts
deseq2 interactions contrast rna-seq written 11 weeks ago by MaithĂȘ Barros0 • updated 11 weeks ago by Michael Love20k
0
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1
answer
145
views
1
answer
A contrast with four simultaneous conditions for DESeq2?
deseq2 contrast results written 5 months ago by jan.soderman0 • updated 5 months ago by Michael Love20k
1
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1
answer
148
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1
answer
2
votes
1
answer
557
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1
answer
4
votes
1
answer
302
views
1
answer
2
votes
1
answer
324
views
1
answer
Multiple test corrections for planed contrasts
deseq2 contrast multiple comparisons written 12 months ago by serpalma.v30 • updated 12 months ago by James W. MacDonald48k
0
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2
answers
471
views
2
answers
Time points and donors - errors with contrasts
deseq2 contrast written 17 months ago by sasha0 • updated 12 months ago by Michael Love20k
0
votes
1
answer
244
views
1
answer
Discrepancy in extracting contrasts
deseq2 contrast batch effect resultsnames written 14 months ago by pkachroo10 • updated 14 months ago by Michael Love20k
2
votes
1
answer
639
views
1
answer
0
votes
1
answer
590
views
1
answer
DESEq2 contrast statement syntax and design statement question
deseq2 interactions contrast written 16 months ago by grashow0 • updated 16 months ago by Michael Love20k
6
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1
answer
2.8k
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1
answer
DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 contrast lfc coef written 16 months ago by Anke Busch0 • updated 16 months ago by Michael Love20k
2
votes
1
answer
590
views
1
answer
EdgeR -ANOVA-like test vs testing individual contrasts
edger anova contrast t-test written 17 months ago by Maiv0 • updated 17 months ago by Aaron Lun21k
0
votes
1
answer
830
views
1
answer
0
votes
1
answer
471
views
1
answer
how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 19 months ago by aec40 • updated 19 months ago by Michael Love20k
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2
answers
702
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2
answers
3
votes
2
answers
801
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2
answers
0
votes
1
answer
589
views
1
answer
intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 21 months ago by prppmet0 • updated 21 months ago by Michael Love20k
2
votes
2
answers
652
views
2
answers
2
votes
1
answer
335
views
1
answer
0
votes
1
answer
360
views
1
answer
edgeR constrast drug treatments and time points
edger contrast written 2.1 years ago by sergio.martinezcuesta10 • updated 2.1 years ago by Aaron Lun21k
0
votes
1
answer
645
views
1
answer
limma camera function Multiple contrasts
microarray limma camera contrast written 2.2 years ago by gaby863820 • updated 2.2 years ago by Gordon Smyth35k
2
votes
1
answer
501
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1
answer
1
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1
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401
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1
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Are these contrasts correct for use in DESeq2?
deseq2 contrast written 2.6 years ago by Jane Merlevede90 • updated 2.6 years ago by Michael Love20k
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