0
votes
1
answer
100
views
1
answer
how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 15 days ago by aec30 • updated 15 days ago by Michael Love12k
0
votes
2
answers
163
views
2
answers
3
votes
2
answers
185
views
2
answers
0
votes
1
answer
118
views
1
answer
intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 10 weeks ago by prppmet0 • updated 9 weeks ago by Michael Love12k
2
votes
2
answers
223
views
2
answers
2
votes
1
answer
124
views
1
answer
0
votes
1
answer
158
views
1
answer
edgeR constrast drug treatments and time points
edger contrast written 6 months ago by sergio.martinezcuesta10 • updated 6 months ago by Aaron Lun14k
0
votes
1
answer
210
views
1
answer
limma camera function Multiple contrasts
microarray limma camera contrast written 7 months ago by gaby86380 • updated 7 months ago by Gordon Smyth30k
2
votes
1
answer
234
views
1
answer
1
vote
1
answer
227
views
1
answer
Are these contrasts correct for use in DESeq2?
deseq2 contrast written 12 months ago by Jane Merlevede80 • updated 12 months ago by Michael Love12k
2
votes
2
answers
313
views
2
answers
0
votes
1
answer
238
views
1
answer
1
vote
2
answers
533
views
2
answers
0
votes
3
answers
656
views
3
answers
4
votes
1
answer
350
views
1
answer
4
votes
2
answers
327
views
2
answers
1
vote
2
answers
328
views
2
answers
0
votes
1
answer
328
views
1
answer
3
votes
1
answer
373
views
1
answer
pass limma contrast matrix variable
limma contrast written 20 months ago by John linux-user210 • updated 20 months ago by Gordon Smyth30k
3
votes
2
answers
761
views
2
answers
All same padj of contrast results in the DESeq2
deseq2 contrast padj results written 21 months ago by jjinhyoungkim0 • updated 21 months ago by Michael Love12k
5
votes
2
answers
452
views
2
answers
2
votes
1
answer
892
views
1
answer
2
votes
2
answers
910
views
2
answers
voom/limma contrast for comparing one level against base-line
limma voom contrast written 2.2 years ago by Stijn van Dongen80 • updated 2.2 years ago by Steve Lianoglou12k
5
votes
1
answer
3.8k
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1
answer
0
votes
1
answer
1.4k
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1
answer
Where to include an interaction term in DESeq2
deseq2 design contrast written 2.3 years ago by ksilkaitis0 • updated 2.3 years ago by Michael Love12k
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