0
votes
1
answer
90
views
1
answer
0
votes
1
answer
110
views
1
answer
A contrast with four simultaneous conditions for DESeq2?
deseq2 contrast results written 3 months ago by jan.soderman0 • updated 3 months ago by Michael Love19k
1
vote
1
answer
101
views
1
answer
2
votes
1
answer
378
views
1
answer
4
votes
1
answer
268
views
1
answer
2
votes
1
answer
284
views
1
answer
Multiple test corrections for planed contrasts
deseq2 contrast multiple comparisons written 10 months ago by serpalma.v30 • updated 10 months ago by James W. MacDonald48k
0
votes
2
answers
424
views
2
answers
Time points and donors - errors with contrasts
deseq2 contrast written 15 months ago by sasha0 • updated 10 months ago by Michael Love19k
0
votes
1
answer
215
views
1
answer
Discrepancy in extracting contrasts
deseq2 contrast batch effect resultsnames written 12 months ago by pkachroo10 • updated 12 months ago by Michael Love19k
2
votes
1
answer
572
views
1
answer
0
votes
1
answer
545
views
1
answer
DESEq2 contrast statement syntax and design statement question
deseq2 interactions contrast written 14 months ago by grashow0 • updated 14 months ago by Michael Love19k
5
votes
1
answer
2.4k
views
1
answer
DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 contrast lfc coef written 14 months ago by Anke Busch0 • updated 14 months ago by Michael Love19k
2
votes
1
answer
496
views
1
answer
EdgeR -ANOVA-like test vs testing individual contrasts
edger anova contrast t-test written 15 months ago by Maiv0 • updated 15 months ago by Aaron Lun21k
0
votes
1
answer
725
views
1
answer
0
votes
1
answer
427
views
1
answer
how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 17 months ago by aec40 • updated 17 months ago by Michael Love19k
0
votes
2
answers
613
views
2
answers
3
votes
2
answers
692
views
2
answers
0
votes
1
answer
529
views
1
answer
intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 19 months ago by prppmet0 • updated 19 months ago by Michael Love19k
2
votes
2
answers
588
views
2
answers
2
votes
1
answer
306
views
1
answer
0
votes
1
answer
341
views
1
answer
edgeR constrast drug treatments and time points
edger contrast written 23 months ago by sergio.martinezcuesta10 • updated 23 months ago by Aaron Lun21k
0
votes
1
answer
582
views
1
answer
limma camera function Multiple contrasts
microarray limma camera contrast written 2.0 years ago by gaby863820 • updated 2.0 years ago by Gordon Smyth35k
2
votes
1
answer
457
views
1
answer
1
vote
1
answer
381
views
1
answer
Are these contrasts correct for use in DESeq2?
deseq2 contrast written 2.4 years ago by Jane Merlevede90 • updated 2.4 years ago by Michael Love19k
2
votes
2
answers
734
views
2
answers
2
votes
1
answer
584
views
1
answer
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