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1
answer
48
views
1
answer
A contrast with four simultaneous conditions for DESeq2?
deseq2 contrast results written 13 days ago by jan.soderman0 • updated 13 days ago by Michael Love18k
1
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1
answer
56
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1
answer
2
votes
1
answer
238
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1
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4
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1
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227
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1
answer
2
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1
answer
232
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1
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Multiple test corrections for planed contrasts
deseq2 contrast multiple comparisons written 7 months ago by serpalma.v30 • updated 7 months ago by James W. MacDonald46k
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2
answers
364
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2
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Time points and donors - errors with contrasts
deseq2 contrast written 12 months ago by sasha0 • updated 7 months ago by Michael Love18k
0
votes
1
answer
170
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1
answer
Discrepancy in extracting contrasts
deseq2 contrast batch effect resultsnames written 9 months ago by pkachroo10 • updated 9 months ago by Michael Love18k
2
votes
1
answer
520
views
1
answer
0
votes
1
answer
484
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1
answer
DESEq2 contrast statement syntax and design statement question
deseq2 interactions contrast written 11 months ago by grashow0 • updated 11 months ago by Michael Love18k
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1
answer
1.9k
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1
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DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 contrast lfc coef written 11 months ago by Anke Busch0 • updated 11 months ago by Michael Love18k
2
votes
1
answer
389
views
1
answer
EdgeR -ANOVA-like test vs testing individual contrasts
edger anova contrast t-test written 12 months ago by Maiv0 • updated 12 months ago by Aaron Lun20k
0
votes
1
answer
561
views
1
answer
0
votes
1
answer
374
views
1
answer
how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 14 months ago by aec40 • updated 14 months ago by Michael Love18k
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2
answers
527
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2
answers
3
votes
2
answers
563
views
2
answers
0
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1
answer
457
views
1
answer
intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 16 months ago by prppmet0 • updated 16 months ago by Michael Love18k
2
votes
2
answers
502
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2
answers
2
votes
1
answer
278
views
1
answer
0
votes
1
answer
317
views
1
answer
edgeR constrast drug treatments and time points
edger contrast written 20 months ago by sergio.martinezcuesta10 • updated 20 months ago by Aaron Lun20k
0
votes
1
answer
491
views
1
answer
limma camera function Multiple contrasts
microarray limma camera contrast written 21 months ago by gaby863820 • updated 21 months ago by Gordon Smyth34k
2
votes
1
answer
419
views
1
answer
1
vote
1
answer
356
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1
answer
Are these contrasts correct for use in DESeq2?
deseq2 contrast written 2.1 years ago by Jane Merlevede90 • updated 2.1 years ago by Michael Love18k
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2
answers
662
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2
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2
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1
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537
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1
answer
2
votes
2
answers
1.4k
views
2
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