0
votes
1
answer
95
views
1
answer
3
votes
1
answer
218
views
1
answer
DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 contrast lfc coef written 18 days ago by Anke Busch0 • updated 18 days ago by Michael Love13k
0
votes
2
answers
93
views
2
answers
2
votes
1
answer
80
views
1
answer
EdgeR -ANOVA-like test vs testing individual contrasts
edger anova contrast t-test written 8 weeks ago by Maiv0 • updated 8 weeks ago by Aaron Lun16k
0
votes
1
answer
151
views
1
answer
0
votes
1
answer
172
views
1
answer
how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 3 months ago by aec30 • updated 3 months ago by Michael Love13k
0
votes
2
answers
227
views
2
answers
3
votes
2
answers
241
views
2
answers
0
votes
1
answer
188
views
1
answer
intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 5 months ago by prppmet0 • updated 5 months ago by Michael Love13k
2
votes
2
answers
275
views
2
answers
2
votes
1
answer
163
views
1
answer
0
votes
1
answer
203
views
1
answer
edgeR constrast drug treatments and time points
edger contrast written 9 months ago by sergio.martinezcuesta10 • updated 9 months ago by Aaron Lun16k
0
votes
1
answer
266
views
1
answer
limma camera function Multiple contrasts
microarray limma camera contrast written 10 months ago by gaby86380 • updated 10 months ago by Gordon Smyth31k
2
votes
1
answer
288
views
1
answer
1
vote
1
answer
265
views
1
answer
Are these contrasts correct for use in DESeq2?
deseq2 contrast written 15 months ago by Jane Merlevede90 • updated 15 months ago by Michael Love13k
2
votes
2
answers
395
views
2
answers
0
votes
1
answer
292
views
1
answer
1
vote
2
answers
671
views
2
answers
0
votes
3
answers
816
views
3
answers
4
votes
1
answer
430
views
1
answer
4
votes
2
answers
375
views
2
answers
1
vote
2
answers
367
views
2
answers
0
votes
1
answer
427
views
1
answer
3
votes
1
answer
438
views
1
answer
pass limma contrast matrix variable
limma contrast written 23 months ago by John linux-user210 • updated 23 months ago by Gordon Smyth31k
3
votes
2
answers
895
views
2
answers
All same padj of contrast results in the DESeq2
deseq2 contrast padj results written 2.0 years ago by jjinhyoungkim10 • updated 2.0 years ago by Michael Love13k
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