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DESeq2: 5 Conditions (B vs C) vs (D vs B)
deseq2 contrast ratio of ratio written 2 days ago by Fischer-philipp0 • updated 2 days ago by Michael Love21k
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lfcShrink, interactions, and ashr
deseq2 contrast lfcshrink written 9 weeks ago by jurbach10 • updated 9 weeks ago by Michael Love21k
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Multi-factor analysis Deseq2
deseq2 contrast ltr written 3 months ago by Ir5sE0 • updated 3 months ago by Michael Love21k
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RNA-seq time course experiment - DESEq2 Contrasts
deseq2 interactions contrast rna-seq written 4 months ago by MaithĂȘ Barros0 • updated 4 months ago by Michael Love21k
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A contrast with four simultaneous conditions for DESeq2?
deseq2 contrast results written 7 months ago by jan.soderman0 • updated 7 months ago by Michael Love21k
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Multiple test corrections for planed contrasts
deseq2 contrast multiple comparisons written 14 months ago by serpalma.v40 • updated 14 months ago by James W. MacDonald49k
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Time points and donors - errors with contrasts
deseq2 contrast written 19 months ago by sasha0 • updated 15 months ago by Michael Love21k
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Discrepancy in extracting contrasts
deseq2 contrast batch effect resultsnames written 16 months ago by pkachroo10 • updated 16 months ago by Michael Love21k
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DESEq2 contrast statement syntax and design statement question
deseq2 interactions contrast written 18 months ago by grashow0 • updated 18 months ago by Michael Love21k
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DESeq2 lfcShrink() usage of coef vs. usage of contrast
deseq2 contrast lfc coef written 18 months ago by Anke Busch0 • updated 18 months ago by Michael Love21k
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EdgeR -ANOVA-like test vs testing individual contrasts
edger anova contrast t-test written 20 months ago by Maiv0 • updated 19 months ago by Aaron Lun22k
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how to extract complex contrast with DESeq2
deseq2 contrast differential gene expression written 21 months ago by aec40 • updated 21 months ago by Michael Love21k
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intra-sample time series comparison using DESeq2
rnaseq deseq2 design contrast time course written 23 months ago by prppmet0 • updated 23 months ago by Michael Love21k
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edgeR constrast drug treatments and time points
edger contrast written 2.3 years ago by sergio.martinezcuesta10 • updated 2.3 years ago by Aaron Lun22k
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limma camera function Multiple contrasts
microarray limma camera contrast written 2.4 years ago by gaby863820 • updated 2.4 years ago by Gordon Smyth36k
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