Showing: coveragereset
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Filtering BAM files by start position for VariantTools
coverage cancer cycle varianttools written 6.5 years ago by Martin Morgan ♦♦ 24k • updated 6.5 years ago by Taylor, Sean D250
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GOseq: count bias correction variations?
coverage goseq written 5.5 years ago by Christopher Conley40 • updated 2.8 years ago by Gordon Smyth39k
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Calculate Outer Positions of GappedAlignmentPairs
coverage genomicranges written 6.8 years ago by Dario Strbenac1.5k • updated 6.8 years ago by Michael Lawrence11k
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coverage on very large ReadGappedAlignmentsObject
coverage genomes written 6.7 years ago by Stefanie360 • updated 6.7 years ago by Martin Morgan ♦♦ 24k
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Blast analysis of two sequences in R
coverage written 5.7 years ago by prabhakar ghorpade100 • updated 5.7 years ago by Martin Morgan ♦♦ 24k
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bamsignals - bamcoverage has no strand-specific option??
coverage bam bamsignals written 3.0 years ago by gtho12340 • updated 3.0 years ago by helmuth0
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Gviz: axes related parameters
coverage gviz written 5.9 years ago by Maxim170 • updated 5.9 years ago by Steve Lianoglou12k
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Calling coverage on GRanges object yields small negative values
coverage granges written 4.8 years ago by Anya10 • updated 4.8 years ago by Hervé Pagès ♦♦ 14k
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views
2
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BH vs BY in p.adjust + FDR interpretation
coverage limma written 13.5 years ago by lemerle@embl.de50 • updated 4.0 years ago by Gordon Smyth39k
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718
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interoperability between IRanges/ShortRead and rtracklayer
coverage rtracklayer iranges written 10.6 years ago by Simon Anders150 • updated 10.6 years ago by Patrick Aboyoun1.6k
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mapping coverage
coverage written 8.9 years ago by Adrian Johnson330 • updated 8.9 years ago by Martin Morgan ♦♦ 24k
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raw counts for edgeR
coverage written 8.7 years ago by Lana Schaffer1.3k • updated 8.7 years ago by Sean Davis21k
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622
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1
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IRanges: Request for a "step" argument in runsum
coverage annotation cancer process iranges genomes written 8.6 years ago by Arnaud Amzallag100 • updated 8.5 years ago by Hervé Pagès ♦♦ 14k
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803
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htSeqTools errors
coverage htseqtools written 7.9 years ago by Juan L. Mateo80 • updated 7.9 years ago by Valerie Obenchain6.7k
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568
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readGapppedAlignmentpairs questions
coverage process written 7.6 years ago by Lakshmanan Iyer250 • updated 7.6 years ago by Wei Shi3.2k
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Wig files?
coverage written 7.5 years ago by Ed Siefker220 • updated 7.5 years ago by Michael Lawrence11k
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Coverage of reads per base position from BAM files
coverage go written 7.5 years ago by Guest User12k • updated 7.5 years ago by Martin Morgan ♦♦ 24k
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865
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1
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Visualization of alignments with mismatch bases
snp coverage alignment visualization ggbio written 6.9 years ago by Michael Lawrence11k • updated 6.9 years ago by Tengfei Yin420
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