Showing: degreset
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Custom post-normalization counts from DESeq2
deseq2 covariate deg written 2 days ago by sum7320 • updated 1 day ago by Michael Love23k
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Counts Worry: DESeq2: DEGs are from genes with mostly zero across groups
deseq2 deg de written 11 weeks ago by hermanapis0 • updated 11 weeks ago by Michael Love23k
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Implications of TMM Normalization and Possible Alternatives
normalization edger deg tmm written 4 months ago by rproendo0 • updated 4 months ago by Gordon Smyth37k
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Difficulty in finding DEG using TCGA data from FireBrowse
limma tcga deg firebrowse written 13 months ago by lawarde.ankita120 • updated 13 months ago by svlachavas660
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RNA-Seq DEG analysis questions
rnaseq deg written 20 months ago by mullin.yu0 • updated 20 months ago by Gordon Smyth37k
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edgeR - MDS Plot for Count Data
edger plot mds deg written 21 months ago by baus870
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Alternative packages to limma for analysis of microarray datasets
microarray limma deg written 2.0 years ago by Maximilian10 • updated 24 months ago by Bernd Klaus550
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fdr score for degs
fdr deg written 2.0 years ago by nia10 • updated 2.0 years ago by svlachavas660
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code for up-down-regulated Degs using R
limma deg written 2.1 years ago by nia10
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DEG analysis by limma
limma deg written 2.4 years ago by Shamim Sarhadi20 • updated 2.4 years ago by Aaron Lun23k
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DEG analysis of chemo-sensitive vs resistance by limma
microarray limma deg written 2.5 years ago by Shamim Sarhadi20 • updated 2.5 years ago by Steve Lianoglou12k
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Filtering before the linear modelling and empirical bayes steps
limma deg filtering written 3.2 years ago by Shamim Sarhadi20 • updated 3.1 years ago by Ryan C. Thompson7.3k
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DEG test for two closely related conditions with limma
limma deg written 3.2 years ago by Shamim Sarhadi20 • updated 3.2 years ago by Aaron Lun23k
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Find DEG from RNA-seq: What if have only RPKM data?
rpkm rna-seq deg written 4.2 years ago by Yue Zhao0 • updated 4.2 years ago by b.nota320
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