1
vote
6
answers
3.0k
views
6
answers
1
vote
6
answers
2.7k
views
6
answers
'Codetools' and 'mgcv' packages fail to update
deseq package updates codetools mgcv written 3.3 years ago by pbhamidipati0 • updated 3.2 years ago by rodrigo_sengo0
0
votes
5
answers
514
views
5
answers
0
votes
5
answers
759
views
5
answers
edgeR - R script - results compared to DESeq
edger deseq written 6.6 years ago by Avinash S40 • updated 6.6 years ago by Smith, Hilary A40
0
votes
5
answers
874
views
5
answers
EasyRNASeq issue (missing bai files)
go process deseq easyrnaseq written 5.9 years ago by delhomme@embl.de1.2k • updated 5.9 years ago by Jorge Beira10
2
votes
5
answers
710
views
5
answers
phyloseq/DESeq gives negative transformed values
microbiome deseq written 4.2 years ago by Sophie Josephine Weiss130 • updated 4.2 years ago by Michael Love18k
1
vote
5
answers
4.7k
views
5
answers
2
votes
5
answers
393
views
5
answers
0
votes
4
answers
749
views
4
answers
DESeq and paired samples - pairing vs pooling
cancer deseq written 7.1 years ago by Timothy Hughes20 • updated 7.1 years ago by Gordon Smyth33k
0
votes
4
answers
1.5k
views
4
answers
0
votes
4
answers
1.9k
views
4
answers
Up & Downregulated genes using DESeq
deseq written 6.2 years ago by OD40 • updated 6.2 years ago by Sunny Yu Liu80
0
votes
4
answers
932
views
4
answers
DEseq version and R version compatibility
deseq written 5.7 years ago by José Luis Lavín270 • updated 5.7 years ago by Thomas Girke1.6k
1
vote
4
answers
1.8k
views
4
answers
DEseq for chip-seq data normalisation
deseq deseq2 written 4.6 years ago by Giuseppe Gallone170 • updated 4.6 years ago by Ying W90
2
votes
4
answers
1.3k
views
4
answers
Running DESeq with 1000 samples
deseq written 4.0 years ago by Guest User12k • updated 3.0 years ago by Guest1950
1
vote
4
answers
1.1k
views
4
answers
18
votes
4
answers
6.2k
views
4
answers
DESeq2 for ChIP-seq differential peaks
chipseq deseq deseq2 written 2.8 years ago by tangming200590 • updated 11 months ago by k.vitting.seerup20
0
votes
3
answers
768
views
3
answers
DESeq and number of replicates required for RNA-Seq
go deseq written 8.0 years ago by michael watson IAH-C3.4k • updated 8.0 years ago by Naomi Altman6.0k
0
votes
3
answers
435
views
3
answers
0
votes
3
answers
995
views
3
answers
mRNA-seq cross-species analysis, is it possible?
genetics normalization proteome deseq written 6.9 years ago by mali salmon320 • updated 6.9 years ago by Davis McCarthy20
0
votes
3
answers
572
views
3
answers
DESeq variance question
edger deseq written 6.6 years ago by Steffen Priebe10 • updated 6.5 years ago by Gordon Smyth33k
0
votes
3
answers
1.3k
views
3
answers
DESeq for an mRNA-seq time course
deseq written 6.5 years ago by Elena Sorokin150
0
votes
3
answers
861
views
3
answers
normalization factors for ChIP/RNA-IP-seq data
edger deseq written 6.4 years ago by mali salmon320 • updated 13 months ago by gaxusoh0
0
votes
3
answers
922
views
3
answers
DESeq on transcripts v/s genes
deseq written 6.4 years ago by Abhishek Pratap400 • updated 6.4 years ago by Wolfgang Huber13k
0
votes
3
answers
444
views
3
answers
package to count read prior to DESeq?
deseq written 6.4 years ago by nac280 • updated 6.4 years ago by Wei Shi2.8k
0
votes
3
answers
876
views
3
answers
DESeq - working with more than 2 conditions
deseq written 5.8 years ago by Vincenzo Capece140 • updated 5.8 years ago by Wolfgang Huber13k
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