1
vote
6
answers
2.7k
views
6
answers
1
vote
6
answers
2.5k
views
6
answers
'Codetools' and 'mgcv' packages fail to update
deseq package updates codetools mgcv written 2.9 years ago by pbhamidipati0 • updated 2.9 years ago by rodrigo_sengo0
0
votes
5
answers
477
views
5
answers
0
votes
5
answers
672
views
5
answers
edgeR - R script - results compared to DESeq
edger deseq written 6.2 years ago by Avinash S40 • updated 6.2 years ago by Smith, Hilary A40
0
votes
5
answers
795
views
5
answers
EasyRNASeq issue (missing bai files)
go process deseq easyrnaseq written 5.6 years ago by delhomme@embl.de1.2k • updated 5.6 years ago by Jorge Beira10
2
votes
5
answers
641
views
5
answers
phyloseq/DESeq gives negative transformed values
microbiome deseq written 3.9 years ago by Sophie Josephine Weiss130 • updated 3.8 years ago by Michael Love16k
1
vote
5
answers
4.0k
views
5
answers
2
votes
5
answers
359
views
5
answers
0
votes
4
answers
657
views
4
answers
DESeq and paired samples - pairing vs pooling
cancer deseq written 6.8 years ago by Timothy Hughes20 • updated 6.8 years ago by Gordon Smyth32k
0
votes
4
answers
1.3k
views
4
answers
0
votes
4
answers
1.6k
views
4
answers
Up & Downregulated genes using DESeq
deseq written 5.9 years ago by OD40 • updated 5.9 years ago by Sunny Yu Liu80
0
votes
4
answers
773
views
4
answers
DEseq version and R version compatibility
deseq written 5.4 years ago by José Luis Lavín270 • updated 5.4 years ago by Thomas Girke1.6k
0
votes
4
answers
1.7k
views
4
answers
DEseq for chip-seq data normalisation
deseq deseq2 written 4.3 years ago by Giuseppe Gallone170 • updated 4.3 years ago by Ying W90
2
votes
4
answers
1.2k
views
4
answers
Running DESeq with 1000 samples
deseq written 3.6 years ago by Guest User12k • updated 2.7 years ago by Guest1950
1
vote
4
answers
970
views
4
answers
18
votes
4
answers
5.4k
views
4
answers
DESeq2 for ChIP-seq differential peaks
chipseq deseq deseq2 written 2.5 years ago by tangming200590 • updated 7 months ago by k.vitting.seerup20
0
votes
3
answers
640
views
3
answers
DESeq and number of replicates required for RNA-Seq
go deseq written 7.7 years ago by michael watson IAH-C3.4k • updated 7.7 years ago by Naomi Altman6.0k
0
votes
3
answers
402
views
3
answers
0
votes
3
answers
892
views
3
answers
mRNA-seq cross-species analysis, is it possible?
genetics normalization proteome deseq written 6.6 years ago by mali salmon320 • updated 6.6 years ago by Davis McCarthy20
0
votes
3
answers
495
views
3
answers
DESeq variance question
edger deseq written 6.2 years ago by Steffen Priebe10 • updated 6.2 years ago by Gordon Smyth32k
0
votes
3
answers
1.2k
views
3
answers
DESeq for an mRNA-seq time course
deseq written 6.1 years ago by Elena Sorokin150
0
votes
3
answers
758
views
3
answers
normalization factors for ChIP/RNA-IP-seq data
edger deseq written 6.1 years ago by mali salmon320 • updated 9 months ago by gaxusoh0
0
votes
3
answers
825
views
3
answers
DESeq on transcripts v/s genes
deseq written 6.1 years ago by Abhishek Pratap400 • updated 6.1 years ago by Wolfgang Huber13k
0
votes
3
answers
390
views
3
answers
package to count read prior to DESeq?
deseq written 6.1 years ago by nac280 • updated 6.1 years ago by Wei Shi2.7k
0
votes
3
answers
700
views
3
answers
DESeq - working with more than 2 conditions
deseq written 5.4 years ago by Vincenzo Capece140 • updated 5.4 years ago by Wolfgang Huber13k
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