8
votes
1
answer
20k
views
8 follow
1
answer
DESeq2 output explanation
deseq deseq2 written 4.1 years ago by francesca.defilippis60 • updated 4.1 years ago by Michael Love20k
3
votes
2
answers
1.8k
views
7 follow
2
answers
9
votes
1
answer
3.2k
views
7 follow
1
answer
0
votes
2
answers
1.0k
views
6 follow
2
answers
10
votes
2
answers
6.9k
views
6 follow
2
answers
6
votes
2
answers
1.6k
views
6 follow
2
answers
3
votes
1
answer
1.6k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 4.5 years ago by bio200160 • updated 4.5 years ago by Michael Love20k
5
votes
3
answers
5.3k
views
5 follow
3
answers
8
votes
1
answer
1.2k
views
5 follow
1
answer
8
votes
1
answer
727
views
5 follow
1
answer
DESeq2: interaction term as in limma
limma deseq deseq2 interaction term written 19 months ago by sbcn60 • updated 19 months ago by Simon Anders3.5k
0
votes
1
answer
774
views
1
answer
Experimental design for RNA-Seq
edger degseq deseq written 8.6 years ago by michael watson IAH-C3.4k • updated 8.6 years ago by Naomi Altman6.0k
1
vote
6
answers
3.3k
views
6
answers
0
votes
2
answers
4.2k
views
2
answers
DeSeq vs current version of Cuffdiff
sequencing bayesian cancer deseq written 6.8 years ago by Richard Friedman2.0k • updated 6.8 years ago by Stephen Turner260
0
votes
1
answer
1.2k
views
1
answer
problem with loading DESeq after upgrading from R 2.14 to R 2.15
gui deseq dexseq written 6.7 years ago by Yue Li370 • updated 6.7 years ago by Yue Li60
0
votes
4
answers
1.1k
views
4
answers
DEseq version and R version compatibility
deseq written 6.2 years ago by José Luis Lavín270 • updated 6.2 years ago by Thomas Girke1.7k
0
votes
1
answer
2.9k
views
1
answer
0
votes
1
answer
1.0k
views
1
answer
GTF file error when using easyRNAseq�
annotation organism bsgenome deseq easyrnaseq written 5.1 years ago by Guest User12k • updated 5.1 years ago by delhomme@embl.de1.2k
0
votes
3
answers
2.7k
views
3
answers
25
votes
2
answers
4.3k
views
2
answers
Normalization methodology in DESeq/DESeq2 vs edgeR
normalization edger deseq deseq2 written 3.1 years ago by Nik Tuzov70 • updated 3.1 years ago by Simon Anders3.5k
3
votes
1
answer
2.2k
views
1
answer
standard error value (lfcSE) returned by DeSeq2
deseq deseq2 standard error lfc lfcse written 21 months ago by tootiki0 • updated 20 months ago by rraadd_80
10
votes
2
answers
937
views
2
answers
0
votes
2
answers
9.5k
views
2
answers
Normalization by DEseq
genetics normalization deseq written 8.2 years ago by Rui Luo20 • updated 9 months ago by diannedai0
0
votes
1
answer
1.5k
views
1
answer
DESeq: GLMs for RNA-Seq with interaction terms
deseq written 7.4 years ago by Eli Meyer20 • updated 7.4 years ago by Kasper Daniel Hansen6.4k
3
votes
1
answer
1.7k
views
1
answer
Nanostring ncounterdata - DESeq
rnaseq normalization preprocessing deseq written 7.4 years ago by Vanessa Vermeirssen20 • updated 7.4 years ago by Simon Anders3.5k
0
votes
2
answers
781
views
2
answers
Fwd: differential binding question
edger deseq written 7.0 years ago by mali salmon330 • updated 7.0 years ago by Rory Stark100
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