9
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1
answer
1.9k
views
7 follow
1
answer
0
votes
2
answers
697
views
6 follow
2
answers
6
votes
2
answers
989
views
6 follow
2
answers
3
votes
1
answer
1.1k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 3.5 years ago by bio200160 • updated 3.5 years ago by Michael Love15k
8
votes
1
answer
850
views
5 follow
1
answer
0
votes
1
answer
537
views
1
answer
Experimental design for RNA-Seq
edger degseq deseq written 7.5 years ago by michael watson IAH-C3.4k • updated 7.5 years ago by Naomi Altman6.0k
1
vote
6
answers
2.5k
views
6
answers
0
votes
2
answers
2.9k
views
2
answers
DeSeq vs current version of Cuffdiff
sequencing bayesian cancer deseq written 5.8 years ago by Richard Friedman2.0k • updated 5.8 years ago by Stephen Turner260
0
votes
1
answer
766
views
1
answer
problem with loading DESeq after upgrading from R 2.14 to R 2.15
gui deseq dexseq written 5.6 years ago by Yue Li370 • updated 5.6 years ago by Yue Li60
0
votes
1
answer
2.2k
views
1
answer
0
votes
1
answer
740
views
1
answer
GTF file error when using easyRNAseq�
annotation organism bsgenome deseq easyrnaseq written 4.0 years ago by Guest User12k • updated 4.0 years ago by delhomme@embl.de1.2k
0
votes
2
answers
1.3k
views
2
answers
0
votes
3
answers
1.9k
views
3
answers
3
votes
1
answer
10k
views
1
answer
DESeq2 output explanation
deseq deseq2 written 3.0 years ago by francesca.defilippis40 • updated 3.0 years ago by Michael Love15k
5
votes
2
answers
4.9k
views
2
answers
25
votes
2
answers
3.1k
views
2
answers
Normalization methodology in DESeq/DESeq2 vs edgeR
normalization edger deseq deseq2 written 2.0 years ago by Nik Tuzov60 • updated 2.0 years ago by Simon Anders3.4k
3
votes
1
answer
756
views
1
answer
standard error value (lfcSE) returned by DeSeq2
deseq deseq2 standard error lfc lfcse written 8 months ago by tootiki0 • updated 7 months ago by rraadd_80
0
votes
1
answer
1.1k
views
1
answer
DESeq: GLMs for RNA-Seq with interaction terms
deseq written 6.4 years ago by Eli Meyer20 • updated 6.4 years ago by Kasper Daniel Hansen6.3k
3
votes
1
answer
1.2k
views
1
answer
Nanostring ncounterdata - DESeq
rnaseq normalization preprocessing deseq written 6.3 years ago by Vanessa Vermeirssen20 • updated 6.3 years ago by Simon Anders3.4k
0
votes
2
answers
535
views
2
answers
Fwd: differential binding question
edger deseq written 5.9 years ago by mali salmon320 • updated 5.9 years ago by Rory Stark100
0
votes
3
answers
674
views
3
answers
normalization factors for ChIP/RNA-IP-seq data
edger deseq written 5.9 years ago by mali salmon320 • updated 6 months ago by gaxusoh0
0
votes
2
answers
590
views
2
answers
re incomplete analysis in Deseq
deseq written 5.7 years ago by Guest User12k • updated 5.7 years ago by Wolfgang Huber13k
0
votes
1
answer
800
views
1
answer
Recommended gene model for DESeq
deseq written 5.6 years ago by Assaf Gordon30 • updated 5.6 years ago by Simon Anders3.4k
0
votes
1
answer
440
views
1
answer
down-expression and high-expression in single cell + amplification
deseq written 5.4 years ago by Guest User12k • updated 5.4 years ago by Tim Triche4.2k
0
votes
1
answer
1.6k
views
1
answer
Estimating Size Factors in DESeq Package
deseq written 5.2 years ago by Andres Eduardo Rodriguez Cubillos20 • updated 5.2 years ago by Simon Anders3.4k
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