9
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1
answer
2.2k
views
7 follow
1
answer
0
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2
answers
746
views
6 follow
2
answers
6
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2
answers
1.1k
views
6 follow
2
answers
3
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1
answer
1.2k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 3.7 years ago by bio200160 • updated 3.7 years ago by Michael Love16k
8
votes
1
answer
946
views
5 follow
1
answer
0
votes
1
answer
597
views
1
answer
Experimental design for RNA-Seq
edger degseq deseq written 7.7 years ago by michael watson IAH-C3.4k • updated 7.7 years ago by Naomi Altman6.0k
1
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6
answers
2.7k
views
6
answers
0
votes
2
answers
3.2k
views
2
answers
DeSeq vs current version of Cuffdiff
sequencing bayesian cancer deseq written 6.0 years ago by Richard Friedman2.0k • updated 6.0 years ago by Stephen Turner260
0
votes
1
answer
841
views
1
answer
problem with loading DESeq after upgrading from R 2.14 to R 2.15
gui deseq dexseq written 5.8 years ago by Yue Li370 • updated 5.8 years ago by Yue Li60
0
votes
1
answer
2.4k
views
1
answer
0
votes
1
answer
813
views
1
answer
GTF file error when using easyRNAseq�
annotation organism bsgenome deseq easyrnaseq written 4.3 years ago by Guest User12k • updated 4.3 years ago by delhomme@embl.de1.2k
0
votes
2
answers
1.4k
views
2
answers
0
votes
3
answers
2.4k
views
3
answers
3
votes
1
answer
12k
views
1
answer
DESeq2 output explanation
deseq deseq2 written 3.3 years ago by francesca.defilippis40 • updated 3.3 years ago by Michael Love16k
5
votes
2
answers
5.4k
views
2
answers
25
votes
2
answers
3.3k
views
2
answers
Normalization methodology in DESeq/DESeq2 vs edgeR
normalization edger deseq deseq2 written 2.3 years ago by Nik Tuzov60 • updated 2.3 years ago by Simon Anders3.4k
3
votes
1
answer
999
views
1
answer
standard error value (lfcSE) returned by DeSeq2
deseq deseq2 standard error lfc lfcse written 11 months ago by tootiki0 • updated 10 months ago by rraadd_80
0
votes
1
answer
1.2k
views
1
answer
DESeq: GLMs for RNA-Seq with interaction terms
deseq written 6.6 years ago by Eli Meyer20 • updated 6.6 years ago by Kasper Daniel Hansen6.3k
3
votes
1
answer
1.3k
views
1
answer
Nanostring ncounterdata - DESeq
rnaseq normalization preprocessing deseq written 6.6 years ago by Vanessa Vermeirssen20 • updated 6.6 years ago by Simon Anders3.4k
0
votes
2
answers
617
views
2
answers
Fwd: differential binding question
edger deseq written 6.1 years ago by mali salmon320 • updated 6.1 years ago by Rory Stark100
0
votes
3
answers
756
views
3
answers
normalization factors for ChIP/RNA-IP-seq data
edger deseq written 6.1 years ago by mali salmon320 • updated 9 months ago by gaxusoh0
0
votes
2
answers
614
views
2
answers
re incomplete analysis in Deseq
deseq written 6.0 years ago by Guest User12k • updated 6.0 years ago by Wolfgang Huber13k
0
votes
1
answer
902
views
1
answer
Recommended gene model for DESeq
deseq written 5.9 years ago by Assaf Gordon30 • updated 5.9 years ago by Simon Anders3.4k
0
votes
1
answer
471
views
1
answer
down-expression and high-expression in single cell + amplification
deseq written 5.7 years ago by Guest User12k • updated 5.7 years ago by Tim Triche4.2k
0
votes
1
answer
1.7k
views
1
answer
Estimating Size Factors in DESeq Package
deseq written 5.5 years ago by Andres Eduardo Rodriguez Cubillos20 • updated 5.5 years ago by Simon Anders3.4k
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