4
votes
1
answer
122
views
1
answer
0
votes
1
answer
78
views
1
answer
Appropriate DESeq2 design for multi-factor comparison within group?
deseq deseq2 written 8 days ago by hrishi27n0 • updated 7 days ago by Michael Love15k
0
votes
1
answer
120
views
1
answer
2
votes
1
answer
79
views
1
answer
0
votes
1
answer
74
views
1
answer
0
votes
1
answer
131
views
1
answer
4
votes
2
answers
109
views
2
answers
0
votes
1
answer
138
views
1
answer
9
votes
2
answers
361
views
2
answers
0
votes
1
answer
571
views
1
answer
0
votes
1
answer
591
views
1
answer
Linear regression in DESeq2
deseq written 4 months ago by chimeric0 • updated 4 months ago by Michael Love15k
3
votes
3
answers
586
views
3
answers
DESeq function taking too long
rnaseq deseq deseq2 factor written 4 months ago by sup23010 • updated 4 months ago by Peter Langfelder1.3k
0
votes
1
answer
141
views
1
answer
name of column in R
deseq htsfilter software error columns metarnaseq written 4 months ago by ed_isfahani0 • updated 4 months ago by Wolfgang Huber13k
18
votes
4
answers
4.8k
views
4
answers
DESeq2 for ChIP-seq differential peaks
chipseq deseq deseq2 written 2.2 years ago by tangming200590 • updated 4 months ago by k.vitting.seerup10
4
votes
1
answer
244
views
1
answer
6
votes
3
answers
3.2k
views
3
answers
Confused in the usage of formula in DESeq or DESeq2
deseq deseq2 written 3.1 years ago by skyoflcz10 • updated 5 months ago by bio200160
1
vote
1
answer
219
views
1
answer
DESeq2 - selective calculation of differential gene expression
deseq deseq2 written 5 months ago by LilithElina0 • updated 5 months ago by Michael Love15k
30
votes
2
answers
978
views
2
answers
0
votes
3
answers
675
views
3
answers
normalization factors for ChIP/RNA-IP-seq data
edger deseq written 5.9 years ago by mali salmon320 • updated 6 months ago by gaxusoh0
5
votes
3
answers
344
views
3
answers
P values from Deseq Analysis
deseq written 6 months ago by spawar20
6
votes
1
answer
290
views
1
answer
DESeq2: interaction term as in limma
limma deseq deseq2 interaction term written 7 months ago by sbcn50 • updated 7 months ago by Simon Anders3.4k
5
votes
2
answers
279
views
2
answers
3
votes
1
answer
757
views
1
answer
standard error value (lfcSE) returned by DeSeq2
deseq deseq2 standard error lfc lfcse written 8 months ago by tootiki0 • updated 7 months ago by rraadd_80
1
vote
1
answer
212
views
1
answer
diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 7 months ago by hwick110 • updated 7 months ago by Aaron Lun17k
3
votes
1
answer
273
views
1
answer
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