Showing: deseqreset
13
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8.2k
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9 follow
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8
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8 follow
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DESeq2 output explanation
deseq deseq2 written 5.0 years ago by francesca.defilippis60 • updated 5.0 years ago by Michael Love26k
9
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7 follow
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4
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DESeq2: Paired Test
deseq deseq2 written 5.6 years ago by Pankaj Agarwal100
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3
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3
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DESeq2 Error in estimateSizeFactorsForMatrix
sequencing alignment deseq deseq2 written 5.5 years ago by Guest User12k • updated 4.5 years ago by gaelgarcia0
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5 follow
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Using DESeq2: experimental design and extracting results
deseq deseq2 written 5.4 years ago by bio200160 • updated 5.4 years ago by Michael Love26k
7
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3
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3
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Confused in the usage of formula in DESeq or DESeq2
deseq deseq2 written 5.1 years ago by skyoflcz20 • updated 2.4 years ago by bio200160
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5 follow
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23
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4
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DESeq2 for ChIP-seq differential peaks
chipseq deseq deseq2 written 4.2 years ago by tangming2005150 • updated 2.4 years ago by k.vitting.seerup100
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Normalization methodology in DESeq/DESeq2 vs edgeR
normalization edger deseq deseq2 written 4.0 years ago by Nik Tuzov70 • updated 4.0 years ago by Simon Anders3.6k
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What problem does the MA plot diagnose? And how do you solve it?
rnaseq deseq deseq2 written 2.7 years ago by ysdel40 • updated 2.7 years ago by Ryan C. Thompson7.4k
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3
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Nanostring ncounterdata - DESeq
rnaseq normalization preprocessing deseq written 8.3 years ago by Vanessa Vermeirssen20 • updated 8.3 years ago by Simon Anders3.6k
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How to output Normalised count data from DESeq?
deseq written 8.3 years ago by Fabrice Tourre970 • updated 8.3 years ago by Andreia Fonseca810
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BaseCounts & edgeR
limma edger deseq written 7.8 years ago by Gordon Smyth39k
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how to get normalized counts from edgeR
deseq written 7.4 years ago by wang peter2.0k • updated 7.4 years ago by Mark Robinson870
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1
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Too many (?) differentially expressed genes - edgeR and DESeq
process edger deseq written 6.3 years ago by Darya Vanichkina110 • updated 6.3 years ago by Wolfgang Huber13k
3
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2.1k
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7 follow
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1
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Using DESeq2: experimental design and extracting results
visualization deseq deseq2 written 5.3 years ago by bio200160 • updated 5.3 years ago by Michael Love26k
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6.2k
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1
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Analyzing RNA-Seq data without replicates using DESeq
deseq deseq2 written 5.2 years ago by solgakar@bi.technion.ac.il60 • updated 5.2 years ago by Michael Love26k
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deseq2: coding 2x2 design
deseq deseq2 written 5.0 years ago by evakfisch10
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Estimation of dispersion in DeSeq and DeSeq2
rnaseq deseq deseq2 written 5.0 years ago by JK10 • updated 5.0 years ago by Michael Love26k
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5.1k
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12
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4.0k
views
5 follow
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