Showing: deseq2 • reset
Search
1
vote
1
answer
76
views
1
answer
DESeq2: differential expression analysis from matrix count with gene annotation
deseq2 dataframe pasilla written 1 day ago by ecg1g15 • 0 • updated 1 day ago by Michael Love ♦ 23k
0
votes
1
answer
66
views
1
answer
DESeq and checkFullRank(modelMatrix)
deseq2 rna written 2 days ago by Merlin • 10 • updated 2 days ago by Michael Love ♦ 23k
0
votes
1
answer
97
views
1
answer
Manually feed DESeq with dispersions
deseq2 written 3 days ago by ruhollah.mb • 0 • updated 3 days ago by Michael Love ♦ 23k
1
vote
1
answer
76
views
1
answer
DESeq2: How does the model of the trend function looks like?
deseq2 gamma-family dispersion trend written 4 days ago by Fischer-philipp • 20 • updated 4 days ago by Michael Love ♦ 23k
0
votes
1
answer
61
views
1
answer
Three-factor design with DESeq2
deseq2 time-course written 4 days ago by h.valipour.k • 0 • updated 4 days ago by Michael Love ♦ 23k
0
votes
1
answer
62
views
1
answer
Installing DESeq2 on Google Cloud
deseq2 written 5 days ago by emilio • 0 • updated 5 days ago by James W. MacDonald ♦ 49k
0
votes
1
answer
31
views
1
answer
DESEQ2 normalization vs Subsampling
deseq2 written 5 days ago by francois.maillard2 • 0 • updated 5 days ago by Michael Love ♦ 23k
1
vote
2
answers
65
views
2
answers
RPM data analysis with DESeq2
deseq2 gene expression rpm written 6 days ago by ruhollah.mb • 0
1
vote
1
answer
44
views
1
answer
Analyzing nested experimental conditions in DESeq2
deseq2 written 6 days ago by cryptic • 0 • updated 6 days ago by Michael Love ♦ 23k
0
votes
2
answers
104
views
2
answers
Unable to install packages
deseq2 software error written 7 days ago by efratsh • 0 • updated 7 days ago by Anh N Tran • 0
0
votes
1
answer
59
views
1
answer
Comparison of Comparisons with DESeq2
deseq2 comparison of comparisons compare two contrasts complex contrast written 7 days ago by dbretta25 • 0 • updated 7 days ago by Michael Love ♦ 23k
0
votes
1
answer
64
views
1
answer
RNAseq analysis DeSeq2 strange MAplot
deseq2 written 7 days ago by alice.checcucci • 0 • updated 7 days ago by Michael Love ♦ 23k
0
votes
1
answer
74
views
1
answer
DESeq2_variance stabilisation (rlog/vst) on cross species samples
deseq2 written 8 days ago by adi.saxena • 0 • updated 8 days ago by Michael Love ♦ 23k
2
votes
1
answer
74
views
1
answer
DESeq2 statistic and design
deseq2 rna written 8 days ago by Merlin • 10 • updated 8 days ago by Michael Love ♦ 23k
3
votes
1
answer
100
views
1
answer
DESeq2 LFCshring=2 or 4
deseq2 written 10 days ago by Merlin • 10 • updated 10 days ago by Michael Love ♦ 23k
3
votes
1
answer
88
views
1
answer
Turn off the functions of estimating dispersions and gene-wise dispersion estimates
deseq2 written 10 days ago by Nicola • 0 • updated 10 days ago by Michael Love ♦ 23k
2
votes
1
answer
106
views
1
answer
Deactivate svalue=T in lfcShrink - DESeq2 - apeglm
deseq2 apeglm written 10 days ago by ATPoint • 0 • updated 10 days ago by Michael Love ♦ 23k
0
votes
1
answer
64
views
1
answer
DESeq2: Minimal experiment-wide log-fold change differences between treatments
deseq2 written 12 days ago by Jack.Hearn • 0 • updated 12 days ago by Michael Love ♦ 23k
2
votes
1
answer
51
views
1
answer
Differential Expression Analysis for Single Population RNASeq in Deseq2
normalization deseq2 written 12 days ago by saicharanp18 • 0 • updated 12 days ago by Michael Love ♦ 23k
3
votes
1
answer
59
views
1
answer
Extracting within subject effect in a between and within subject model with DESeq2
deseq2 design written 13 days ago by i.sudbery • 10 • updated 12 days ago by Michael Love ♦ 23k
0
votes
2
answers
72
views
2
answers
Variance for paired design - DESeq2
deseq2 written 13 days ago by gthm • 20 • updated 13 days ago by Michael Love ♦ 23k
5
votes
2
answers
53
views
2
answers
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
deseq2 written 13 days ago by charlesgwellem • 0 • updated 13 days ago by Luiz • 10
1
vote
1
answer
69
views
1
answer
DESeq2 log2FoldChange is very large and differs strongly from manually calculated.
rnaseq deseq2 written 13 days ago by Matthias • 0 • updated 13 days ago by Michael Love ♦ 23k
0
votes
1
answer
52
views
1
answer
DESeq2: Should lfcShrink require contrast or coef if a results object is supplied?
deseq2 written 13 days ago by tdanhorn • 0 • updated 13 days ago by Michael Love ♦ 23k
1
vote
1
answer
61
views
1
answer
"degPatterns" showed 6 clusters, but why no genes in cluster 1-4, but all clustering genes in cluster 5 and 6
deseq2 degreport written 16 days ago by lqsdau • 10 • updated 14 days ago by Lorena Pantano • 90
<prev • 2,333 results • page 1 of 94 • next >
Recent...
Replies
Votes
Awards • All »
Locations • All »
  • European Union, 14 minutes ago
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 268 users visited in the last hour