0
votes
2
answers
67
views
2
answers
1
vote
1
answer
84
views
1
answer
2
votes
1
answer
110
views
1
answer
DEseq2 for several experiments with one condition
de rna-seq deseq2 written 3 days ago by elhamdallalbashi0 • updated 2 days ago by Michael Love10k
0
votes
1
answer
84
views
1
answer
PCA plot in DESeq2
deseq2 pca plot written 4 days ago by pkachroo10 • updated 4 days ago by Michael Love10k
0
votes
1
answer
66
views
1
answer
Contrast analysis for A B or B A
deseq2 written 5 days ago by sanrrone0 • updated 5 days ago by Michael Love10k
3
votes
2
answers
159
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2
answers
DESeq2 with contaminating cell types
rna-seq deseq2 written 8 days ago by hughes.drew80 • updated 5 days ago by Michael Love10k
5
votes
1
answer
50
views
1
answer
What's the relationship between "design" and "contrasts"?
deseq2 written 6 days ago by kjo10 • updated 6 days ago by Ryan C. Thompson5.2k
2
votes
1
answer
96
views
1
answer
1
vote
1
answer
127
views
1
answer
DE by DEseq2
deseq2 written 8 days ago by elhamdallalbashi0 • updated 7 days ago by gavinpaulkelly80
1
vote
1
answer
77
views
1
answer
DESeq2 analysis with a continuous covariate
continuous covariate deseq2 written 8 days ago by choiahy0 • updated 7 days ago by gavinpaulkelly80
0
votes
2
answers
69
views
2
answers
DESeq2: Multivariate Models and Model Statistic
deseq2 written 8 days ago by faded_mystery0 • updated 8 days ago by Michael Love10k
3
votes
1
answer
94
views
1
answer
Installation of package DESeq2
rcurl annotate genefilter geneplotter deseq2 written 8 days ago by Rémi Willamme0 • updated 8 days ago by Martin Morgan ♦♦ 19k
3
votes
1
answer
74
views
1
answer
DESeq2 comparing interaction terms between multiple genotypes
deseq2 written 8 days ago by szhen0 • updated 8 days ago by gavinpaulkelly80
0
votes
1
answer
70
views
1
answer
Unable to download DESeq2
deseq2 written 9 days ago by cclayton0 • updated 9 days ago by Michael Love10k
0
votes
1
answer
84
views
1
answer
10
votes
1
answer
83
views
1
answer
DESeq fitted values using coefficients vs mu
deseq2 written 13 days ago by Matthew McCall760 • updated 12 days ago by Michael Love10k
0
votes
1
answer
95
views
1
answer
Per gene Covariates
ancestry deseq2 written 13 days ago by kodream0
3
votes
2
answers
99
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2
answers
plotPCA - how to add labels to a PCA plot
plotpca labels deseq2 written 14 days ago by al-ash0 • updated 14 days ago by Federico Marini90
4
votes
1
answer
121
views
1
answer
2
votes
1
answer
95
views
1
answer
1
vote
1
answer
71
views
1
answer
trouble installing DESeq2
deseq2 written 15 days ago by nkinney060 • updated 15 days ago by Michael Love10k
0
votes
2
answers
1.4k
views
2
answers
DESeq2 multiple factors nested design
deseq deseq2 written 2.8 years ago by Guest User12k • updated 19 days ago by blawney0
0
votes
1
answer
115
views
1
answer
Comparing two RNASeq protocols using DESeq2
deseq2 adjusted pvalue written 21 days ago by pkachroo10 • updated 20 days ago by Michael Love10k
0
votes
1
answer
90
views
1
answer
Expected counts from RSEM in DESeq2
raw_counts rsem deseq2 expected_counts written 20 days ago by chudar.chudar0 • updated 20 days ago by Michael Love10k
3
votes
1
answer
108
views
1
answer
Why does rlog and vst use normalized counts?
deseq2 written 28 days ago by Jon Bråte130 • updated 28 days ago by Steve Lianoglou11k
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