0
votes
1
answer
33
views
1
answer
Calling differential peaks from ATAC-seq data using DEseq2
deseq2 atac-seq written 9 hours ago by zhongjixx0 • updated 7 hours ago by Rory Stark2.1k
0
votes
0
answers
26
views
0
answers
1
vote
1
answer
87
views
1
answer
0
votes
1
answer
67
views
1
answer
Running DESeq2 on top variable genes?
deseq2 genes variance written 1 day ago by hs.lansdell10 • updated 1 day ago by Michael Love15k
0
votes
1
answer
64
views
1
answer
0
votes
1
answer
52
views
1
answer
0
votes
1
answer
91
views
1
answer
0
votes
1
answer
260
views
1
answer
Multi Anova in DESeq2
deseq2 written 9 months ago by denius0 • updated 2 days ago by Michael Love15k
0
votes
1
answer
74
views
1
answer
0
votes
2
answers
174
views
2
answers
Time points and donors - errors with contrasts
deseq2 contrast written 4 months ago by sasha0 • updated 2 days ago by Michael Love15k
0
votes
1
answer
85
views
1
answer
0
votes
2
answers
96
views
2
answers
1
vote
1
answer
72
views
1
answer
DESeq2 for differential gene expression on GTEx dataset
rnaseq deseq2 gtex written 3 days ago by vikram0 • updated 3 days ago by Michael Love15k
2
votes
1
answer
107
views
1
answer
0
votes
1
answer
139
views
1
answer
4
votes
1
answer
122
views
1
answer
0
votes
1
answer
78
views
1
answer
Appropriate DESeq2 design for multi-factor comparison within group?
deseq deseq2 written 7 days ago by hrishi27n0 • updated 7 days ago by Michael Love15k
4
votes
3
answers
472
views
3
answers
Choosing a threshold for minimum counts in RNAseq
rnaseq deseq2 written 17 months ago by laianavarromartin10 • updated 8 days ago by Michael Love15k
0
votes
1
answer
72
views
1
answer
PCA on deseq2 gene data set
deseq2 pcaexplorer genespca written 8 days ago by sally_b860 • updated 8 days ago by Michael Love15k
1
vote
1
answer
132
views
1
answer
lfcShrink and factors with multiple levels
deseq2 relevel lfcshrink written 9 days ago by mat.lesche20 • updated 9 days ago by Michael Love15k
3
votes
1
answer
116
views
1
answer
DESeq2 biais when genes are missing from the annotation?
rnaseq deseq2 written 10 days ago by corend0 • updated 9 days ago by Michael Love15k
0
votes
1
answer
346
views
1
answer
Deseq2 independent filtering not relevant for my data?
deseq2 written 2.2 years ago by ramiro.barrantes10 • updated 9 days ago by Michael Love15k
4
votes
1
answer
356
views
1
answer
2
votes
1
answer
640
views
1
answer
0
votes
2
answers
420
views
2
answers
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