Showing: deseq2reset
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Biased results of DESeq2 LRT (Group name order)
deseq2 written 3 hours ago by minyoungcho930 • updated 3 hours ago by Michael Love25k
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How to create manhattan plot with DESeq2
deseq2 rna seq mahattan plot written 15 hours ago by adeler0010 • updated 14 hours ago by Michael Love25k
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What are size factors used for in baseMean calculation
deseq2 written 1 day ago by lizzid0 • updated 1 day ago by Michael Love25k
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How I deal with this expression set
deseq2 R written 1 day ago by jivarajivaraj10 • updated 1 day ago by Michael Love25k
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DEseq2 loading library problem
deseq2 written 3 days ago by shilabr0 • updated 3 days ago by Martin Morgan ♦♦ 23k
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DESeq2 installation issue
deseq2 written 3 days ago by eric.trezel0 • updated 3 days ago by Martin Morgan ♦♦ 23k
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DESeq2 analysis with multiple factors
deseq2 deg multiplefactors written 3 days ago by yura.song0 • updated 3 days ago by Steve Lianoglou12k
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write.table of DESeq2 results broken down by LFC
deseq2 written 4 days ago by rbronste60 • updated 4 days ago by Michael Love25k
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Differential gene expression analysis
deseq2 written 4 days ago by rthapa0 • updated 4 days ago by Michael Love25k
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Difference in PCA variance calculation in DESeq2
deseq2 hclust pca written 4 days ago by ag1805x20 • updated 4 days ago by Michael Love25k
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tximeta link to transcriptome
deseq2 written 5 days ago by eric.blanc0 • updated 5 days ago by Michael Love25k
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Paired t-test with DESeq2
deseq2 written 12 days ago by Mozart10 • updated 12 days ago by swbarnes2330
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DESeq2 using many cores despite parallel = FALSE
deseq2 parallel written 13 days ago by symbiologist0 • updated 13 days ago by Michael Love25k
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Modelling a multiplicative batch effect with DESeq2
deseq2 combat batch-effects written 14 days ago by Samuel0 • updated 13 days ago by Michael Love25k
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DESeq2 VS edgeR DEG results different in analysis same data
edger deseq2 written 15 days ago by 159580212900 • updated 14 days ago by Gordon Smyth39k
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Combining RSEM Files with dif row # for tximport
rnaseq deseq2 tximport written 15 days ago by venura0 • updated 15 days ago by Michael Love25k
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Batch effects between different sequencing runs
deseq2 batchcorrection written 17 days ago by A40 • updated 17 days ago by swbarnes2330
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DESeq2 lfcshrink generate 0 svalues
deseq2 written 17 days ago by corentin.lyon0 • updated 17 days ago by Michael Love25k
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