2
votes
1
answer
83
views
1
answer
DESeq2 combining factors in contrasts
deseq2 written 11 days ago by chang02_2320 • updated 11 days ago by Michael Love14k
4
votes
1
answer
141
views
1
answer
2 cells X 2 conditions X patients
deseq2 written 11 days ago by dickson.russel10 • updated 11 days ago by Michael Love14k
0
votes
1
answer
76
views
1
answer
Deseq2 for small matched samples
deseq2 written 11 days ago by lirongrossmann0 • updated 11 days ago by Michael Love14k
0
votes
2
answers
93
views
2
answers
Design model for DESeq2 analysis
deseq2 differential gene expression written 12 days ago by hs.lansdell10 • updated 11 days ago by Gavin Kelly510
1
vote
1
answer
89
views
1
answer
0
votes
1
answer
110
views
1
answer
1
vote
1
answer
120
views
1
answer
3
votes
1
answer
103
views
1
answer
DESeq2 'results' usability issue
deseq2 written 15 days ago by Gavin Kelly510 • updated 15 days ago by Michael Love14k
0
votes
1
answer
168
views
1
answer
0
votes
1
answer
101
views
1
answer
DESeq2 output number of genes padj <0.1 is 0?
deseq2 adjusted pvalue written 15 days ago by hs.lansdell10 • updated 15 days ago by Michael Love14k
2
votes
1
answer
122
views
1
answer
0
votes
1
answer
68
views
1
answer
0
votes
1
answer
76
views
1
answer
Write table returning the same number of DEGs for different conditions. Why?
deseq2 written 17 days ago by Letícia0 • updated 17 days ago by Michael Love14k
6
votes
1
answer
103
views
1
answer
Comparing one condition to multiple others using DESeq2 contrasts
deseq2 written 18 days ago by thibault.lorin3420 • updated 17 days ago by Sean Davis21k
14
votes
6
answers
1.5k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 20 months ago by florian.noack60 • updated 17 days ago by Rory Stark2.1k
2
votes
1
answer
88
views
1
answer
Interaction with DESeq2 via DiffBind
diffbind deseq2 interactions written 24 days ago by rbronste20 • updated 17 days ago by Rory Stark2.1k
0
votes
1
answer
82
views
1
answer
DESeq2: error with DESeqDataSet function
deseq2 error deseqdataset deseqdataset written 17 days ago by Elias Ruiz0 • updated 17 days ago by Michael Love14k
0
votes
1
answer
71
views
1
answer
2
votes
1
answer
93
views
1
answer
0
votes
1
answer
88
views
1
answer
normalizationFactors DESeq2 package
deseq2 tutorial written 19 days ago by mariamari6936930 • updated 19 days ago by Gordon Smyth32k
0
votes
1
answer
112
views
1
answer
3
votes
2
answers
121
views
2
answers
DESeq2 dispersion and p-value histograms
rnaseq deseq2 dispersion fdrtool written 22 days ago by rrcutler30 • updated 19 days ago by Bernd Klaus470
1
vote
1
answer
64
views
1
answer
Pre-filtering DESeqDataSetFromMatrix input
deseq2 differential binding analysis written 19 days ago by rbronste20 • updated 19 days ago by James W. MacDonald45k
0
votes
1
answer
69
views
1
answer
0
votes
1
answer
96
views
1
answer
Using DESeq2 for DEG.
deseq2 written 22 days ago by Natasha0 • updated 22 days ago by Michael Love14k
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