2
votes
1
answer
107
views
1
answer
Inconsistent result between limma/voom and DESeq2
rnaseq limma deseq2 voom limma-voom written 16 days ago by bharata180330 • updated 16 days ago by Gordon Smyth35k
3
votes
2
answers
73
views
2
answers
WGCNA following salmon/DESeq2
deseq2 wgcna salmon written 17 days ago by maya.kappil0 • updated 17 days ago by Peter Langfelder1.6k
2
votes
1
answer
80
views
1
answer
0
votes
2
answers
73
views
2
answers
DESeq2 for Cut&Run and differential enrichment testing
deseq2 cut&run written 17 days ago by MPerch0 • updated 17 days ago by Michael Love20k
0
votes
2
answers
67
views
2
answers
logfold shrinkage DESeq2
deseq2 written 17 days ago by sherajilir0
0
votes
1
answer
42
views
1
answer
0
votes
1
answer
84
views
1
answer
MA plot scattering pattern
deseq2 maplot written 19 days ago by avitalwasser0
1
vote
1
answer
76
views
1
answer
Do I have too many samples or are some samples causing issues?
deseq2 written 18 days ago by cmfield0 • updated 18 days ago by Michael Love20k
6
votes
2
answers
119
views
2
answers
0
votes
1
answer
85
views
1
answer
DESeq2 on mixed species samples
deseq2 written 19 days ago by swbarnes250 • updated 19 days ago by James W. MacDonald48k
1
vote
1
answer
66
views
1
answer
Question regarding class imbalance and low sample size for DESeq2
deseq2 written 20 days ago by munna.uppal0 • updated 19 days ago by Michael Love20k
0
votes
1
answer
90
views
1
answer
DESeq2 multifactor formula design
deseq2 multiple factor design time series written 22 days ago by Jane0 • updated 19 days ago by Michael Love20k
0
votes
1
answer
65
views
1
answer
1
vote
1
answer
74
views
1
answer
0
votes
1
answer
67
views
1
answer
DESeq2 coefficients for APEGLM-shrinkage
deseq2 apeglm written 20 days ago by zolotaryovgl0 • updated 19 days ago by Michael Love20k
0
votes
1
answer
42
views
1
answer
DESeq2 ratio of small p-values plot
deseq2 diagnostic plots written 19 days ago by Nancy0 • updated 19 days ago by Michael Love20k
1
vote
2
answers
134
views
2
answers
0
votes
1
answer
62
views
1
answer
0
votes
1
answer
60
views
1
answer
DESeq2: removal of duplicated genes during statistical analysis
deseq2 ensembl gene symbol written 22 days ago by tkapell0 • updated 20 days ago by Michael Love20k
1
vote
1
answer
57
views
1
answer
DEseq2 with different fastq read numbers after salmon
deseq2 salmon salmon rna seq written 21 days ago by danalvoronov10 • updated 20 days ago by Michael Love20k
0
votes
1
answer
57
views
1
answer
4
votes
2
answers
130
views
2
answers
0
votes
1
answer
48
views
1
answer
0
votes
1
answer
62
views
1
answer
0
votes
1
answer
62
views
1
answer
Issue with normalization in DESeq2
rnaseq normalization deseq2 written 24 days ago by jmoehlin0 • updated 24 days ago by Michael Love20k
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