Showing: deseq2reset
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Advice on correcting for batch effect using DESeq2
deseq2 written 13 days ago by C T90 • updated 13 days ago by Michael Love23k
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75
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Complex Design matrix for DE analysis
limma edger deseq2 written 13 days ago by sutturka0 • updated 13 days ago by Michael Love23k
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48
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Up and down regulated genes in deseq2
deseq2 up-regulated down-regulate written 13 days ago by anaQ0 • updated 13 days ago by Michael Love23k
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Time Comparisons in Deseq2
deseq2 written 14 days ago by mrfossl970 • updated 14 days ago by Michael Love23k
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35
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no gene names in deseq2 result file
deseq2 written 14 days ago by nabiyogesh0 • updated 14 days ago by Michael Love23k
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Comparison of samples of different time points using DESeq2.
deseq2 written 14 days ago by snu_jh0 • updated 14 days ago by Michael Love23k
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DESeq2 setting significant p-value
deseq2 written 14 days ago by Merlin 10 • updated 14 days ago by Michael Love23k
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Robust FPM with normalization factors (from tximport)?
normalization deseq2 tximport written 14 days ago by Roger0 • updated 14 days ago by Michael Love23k
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z-score with DESeq2?
deseq2 written 15 days ago by andrebolerbarros10 • updated 15 days ago by Michael Love23k
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Question about outlier detection for continuous phenotype using DESeq2
deseq2 written 16 days ago by xuren21200 • updated 16 days ago by Michael Love23k
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Using vegan::betadisper for determing if I subset my design for DESeq2
deseq2 written 19 days ago by andrebolerbarros10 • updated 19 days ago by Michael Love23k
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72
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lfc shrinkage two factor experiment
deseq2 lfcshrink written 20 days ago by rbutler0 • updated 20 days ago by Michael Love23k
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109
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Problem with construction of DESeqDataSet object
deseq2 written 21 days ago by purinprima10 • updated 21 days ago by Michael Love23k
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Deseq2 design for repeated measure
deseq2 written 21 days ago by mila.grinblat0 • updated 21 days ago by Michael Love23k
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63
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DESeq2 paired comparison, unexpected results
deseq2 written 25 days ago by staaln0 • updated 25 days ago by Michael Love23k
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109
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2
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tximport, Kallisto and Deseq2 (quick answer)
deseq2 counts tximport kallisto written 25 days ago by maria10 • updated 25 days ago by Michael Love23k
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DESeq2 Design for 2 Conditions
deseq2 R rna-seq written 26 days ago by rick.nickroller0 • updated 26 days ago by Michael Love23k
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tximport and txOut
deseq2 tximport written 26 days ago by Merlin 10 • updated 26 days ago by Michael Love23k
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DESeqDataSetFromMatrix NA error while there is no NA in the data
deseq2 written 27 days ago by lucie.laplane0 • updated 27 days ago by Michael Love23k
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