Showing: deseq2reset
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Using RUVs with known batches
deseq2 ruvseq written 12 days ago by Frederik Ziebell0 • updated 11 days ago by Michael Love24k
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TMM Normalization: DESeqDataSet: some values in assay are negative
normalization deseq deseq2 written 27 days ago by neekonsu0 • updated 12 days ago by wunderl20
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understanding DEseq2 interactions before/after releveling the baseline
deseq2 written 13 days ago by assaf www140 • updated 12 days ago by Michael Love24k
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Request for offset slot in DESeqDataSet objects
edaseq deseq2 written 12 days ago by jeroen.gilis0 • updated 12 days ago by Michael Love24k
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appropriate design formula
deseq2 written 13 days ago by mr65188490 • updated 13 days ago by Michael Love24k
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Identifying cell line-independent DEG in a time series (DESeq2)
deseq2 written 17 days ago by jhnwphillips0 • updated 17 days ago by Michael Love24k
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Filtering extraneous samples affects DESeq results. What is going on?
deseq deseq2 written 18 days ago by sxv0 • updated 18 days ago by Michael Love24k
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could the result of DEseq2 by LRT be used in SPIA directly?
deseq2 written 19 days ago by qq8098257060 • updated 18 days ago by Michael Love24k
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DESeq2 for multiple groups
deseq2 written 19 days ago by ijvechetti0 • updated 19 days ago by Steve Lianoglou12k
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Extract residuals from DESeq2 fit
deseq2 residuals written 20 days ago by MWSchmid0 • updated 20 days ago by Michael Love24k
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Heatmap of selected genes
rnaseq deseq2 heatmap degs written 21 days ago by danikadigiacomo0 • updated 21 days ago by mikhael.manurung130
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DESeq2: Sample outlier patterns 'switching' after normalization
normalization deseq2 written 23 days ago by wunderl20 • updated 23 days ago by Michael Love24k
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Interpretation of the heatmap produced by DESeq2
deseq2 written 23 days ago by yh3620 • updated 23 days ago by Michael Love24k
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too few replicates to observe statistically significant differences
deseq2 written 24 days ago by dennism92510 • updated 24 days ago by Michael Love24k
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deseq2 formula design
deseq2 written 25 days ago by nabiyogesh0 • updated 24 days ago by swbarnes2240
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RNAseq and heatmap
deseq2 rna-seq heatmap written 25 days ago by Merlin 10 • updated 25 days ago by Michael Love24k
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Random effects in DESeq2
deseq2 written 25 days ago by c.taylor0 • updated 25 days ago by Michael Love24k
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DESeq2: Error when correcting batch effect
deseq2 batch effect written 25 days ago by Rimma0 • updated 25 days ago by Michael Love24k
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