Showing: deseq2reset
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DESeqDataSetFromTximport with kallisto abundances.
deseq2 tximport written 22 months ago by ben30 • updated 18 months ago by Ming Wang0
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Log2FoldChange shrinkage method in DESeq2
deseq2 lfcshrink apeglm written 11 months ago by Benjamin Ostendorf80 • updated 11 months ago by Michael Love23k
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DESeq2 on NanoString Data
deseq2 nanostring written 10 months ago by casey.rimland100 • updated 10 months ago by Michael Love23k
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Dispersion fit and p-value distributions
rnaseq deseq2 fdrtool written 6 months ago by C T90 • updated 6 months ago by Ryan C. Thompson7.3k
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DESeq2: Paired Test
deseq deseq2 written 5.0 years ago by Pankaj Agarwal100
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DESeq2 Error in estimateSizeFactorsForMatrix
sequencing alignment deseq deseq2 written 4.9 years ago by Guest User12k • updated 3.9 years ago by gaelgarcia0
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Using DESeq2: experimental design and extracting results
deseq deseq2 written 4.9 years ago by bio200160 • updated 4.9 years ago by Michael Love23k
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Confused in the usage of formula in DESeq or DESeq2
deseq deseq2 written 4.5 years ago by skyoflcz20 • updated 22 months ago by bio200160
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DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 4.5 years ago by Darya Vanichkina110 • updated 3.3 years ago by bioprog0
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DESeq2 Model Design
deseq2 linear model model written 4.4 years ago by andrew.j.skelton73310 • updated 4.4 years ago by James W. MacDonald49k
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DESeq2 baseMean values for each sample
deseq2 written 4.4 years ago by aburkha6920
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PlotMA Error_Coercing to a vector
deseq2 written 4.0 years ago by Jessica Chen20
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DESeq2 results with RUVSeq values
deseq2 ruvseq sizefacotrs written 4.0 years ago by Assa Yeroslaviz1.4k • updated 3.9 years ago by davide risso810
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Dependence of rlog transformed value range on number of samples
deseq2 rlog written 3.9 years ago by snsansom20 • updated 3.9 years ago by Michael Love23k
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Group comparison in DESeq2
deseq2 results written 3.7 years ago by jjinhyoungkim20 • updated 3.7 years ago by Michael Love23k
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DeSeq2 - hill–shaped histogram of pvalues
deseq2 pvalue histogram written 3.7 years ago by deut1370 • updated 3.7 years ago by Bernd Klaus540
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Using limma::roast/camera/romer etc from DESeq2
limma edger camera deseq2 romer written 3.7 years ago by phil.chapman140 • updated 3.7 years ago by Gordon Smyth37k
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DESeq2 rlog error
deseq2 written 3.5 years ago by bruce.moran20 • updated 3.5 years ago by Michael Love23k
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normalized data by DESeq2 look suspicious
deseq2 written 3.5 years ago by tonja.r40 • updated 3.5 years ago by Ryan C. Thompson7.3k
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