15
votes
0
answers
4.0k
views
13 follow
0
answers
5
votes
1
answer
970
views
9 follow
1
answer
13
votes
3
answers
3.4k
views
12 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 9 months ago by Michael Love16k
3
votes
1
answer
1.2k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 3.7 years ago by bio200160 • updated 3.7 years ago by Michael Love16k
9
votes
2
answers
4.6k
views
10 follow
2
answers
4
votes
1
answer
2.1k
views
5 follow
1
answer
interpreting LRT results DESeq2
deseq2 rna-seq lrt written 2.9 years ago by solgakar@bi.technion.ac.il60 • updated 2.9 years ago by Michael Love16k
8
votes
1
answer
5.0k
views
8 follow
1
answer
DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 2.8 years ago by kmu00430 • updated 2.8 years ago by Michael Love16k
3
votes
1
answer
1.4k
views
5 follow
1
answer
DeSeq2 - hill–shaped histogram of pvalues
deseq2 pvalue histogram written 2.5 years ago by deut1370 • updated 2.5 years ago by Bernd Klaus480
13
votes
2
answers
1.3k
views
8 follow
2
answers
14
votes
6
answers
1.7k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 23 months ago by florian.noack60 • updated 3 months ago by Rory Stark2.3k
3
votes
1
answer
404
views
6 follow
1
answer
7
votes
1
answer
585
views
6 follow
1
answer
6
votes
1
answer
1.3k
views
5 follow
1
answer
1
vote
1
answer
1.6k
views
1
answer
pre-ranked GSEA within R? + Best DESeq2/limma-voom metric?
deseq2 written 4.1 years ago by Gordon Smyth32k • updated 4.1 years ago by Jose M Garcia Manteiga310
1
vote
2
answers
687
views
2
answers
2
votes
2
answers
5.4k
views
2
answers
DESeq2: Paired Test
deseq deseq2 written 3.9 years ago by Pankaj Agarwal100
1
vote
1
answer
866
views
1
answer
DESeq2 Regularised Log for Clustering of Genes
clustering deseq2 written 3.8 years ago by Michael Love16k • updated 3.8 years ago by Simon Anders3.4k
1
vote
1
answer
5.6k
views
1
answer
DESeq2 - paired sample, interaction and fold change
deseq2 written 3.7 years ago by samuel collombet110 • updated 3.7 years ago by Michael Love16k
1
vote
1
answer
849
views
1
answer
DESeq2: nested multi-factor design, singular matrix error
deseq2 written 3.6 years ago by BJ Chen60 • updated 3.6 years ago by Michael Love16k
1
vote
1
answer
1.2k
views
1
answer
Using DESeq2: experimental design and extracting results
visualization deseq deseq2 written 3.6 years ago by bio200160 • updated 3.6 years ago by Michael Love16k
1
vote
1
answer
1.1k
views
1
answer
Multifactor model design for DE analysis (DESeq2 & edgeR)
cancer edger deseq2 written 3.5 years ago by Mathieu Bahin30 • updated 3.5 years ago by Simon Anders3.4k
7
votes
1
answer
4.3k
views
1
answer
3
votes
1
answer
1.3k
views
6 follow
1
answer
2
votes
2
answers
944
views
2
answers
deseq2: coding 2x2 design
deseq deseq2 written 3.3 years ago by evakfisch10
2
votes
3
answers
5.5k
views
5 follow
3
answers
DEseq2 time-series design.
timecourse deseq2 design written 3.3 years ago by shao80 • updated 2.8 years ago by lmolla0
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