15
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0
answers
3.8k
views
13 follow
0
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5
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1
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689
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9 follow
1
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3
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1
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1.0k
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5 follow
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Using DESeq2: experimental design and extracting results
deseq deseq2 written 3.5 years ago by bio200160 • updated 3.5 years ago by Michael Love15k
8
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2
answers
4.2k
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9 follow
2
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8
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1
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4.0k
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8 follow
1
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DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 2.5 years ago by kmu00430 • updated 2.5 years ago by Michael Love15k
14
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6
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1.5k
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10 follow
6
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 20 months ago by florian.noack60 • updated 20 days ago by Rory Stark2.1k
3
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1
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362
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6 follow
1
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1
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1
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1.5k
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1
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pre-ranked GSEA within R? + Best DESeq2/limma-voom metric?
deseq2 written 3.8 years ago by Gordon Smyth32k • updated 3.8 years ago by Jose M Garcia Manteiga310
1
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2
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635
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2
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2
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2
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4.9k
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2
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DESeq2: Paired Test
deseq deseq2 written 3.6 years ago by Pankaj Agarwal100
1
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1
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815
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1
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DESeq2 Regularised Log for Clustering of Genes
clustering deseq2 written 3.5 years ago by Michael Love15k • updated 3.5 years ago by Simon Anders3.4k
1
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1
answer
772
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1
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DESeq2: nested multi-factor design, singular matrix error
deseq2 written 3.3 years ago by BJ Chen60 • updated 3.3 years ago by Michael Love15k
1
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1
answer
1.1k
views
1
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Using DESeq2: experimental design and extracting results
visualization deseq deseq2 written 3.3 years ago by bio200160 • updated 3.3 years ago by Michael Love15k
1
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1
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1.1k
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1
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Multifactor model design for DE analysis (DESeq2 & edgeR)
cancer edger deseq2 written 3.3 years ago by Mathieu Bahin30 • updated 3.3 years ago by Simon Anders3.4k
7
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3
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2
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865
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deseq2: coding 2x2 design
deseq deseq2 written 3.1 years ago by evakfisch10
2
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3
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5.0k
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3
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DEseq2 time-series design.
timecourse deseq2 design written 3.0 years ago by shao80 • updated 2.5 years ago by lmolla0
3
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1
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10k
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1
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DESeq2 output explanation
deseq deseq2 written 3.0 years ago by francesca.defilippis40 • updated 3.0 years ago by Michael Love15k
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5.7k
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2
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6
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3
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DESeq2 baseMean values for each sample
deseq2 written 2.9 years ago by aburkha6920
3
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1
answer
661
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1
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2
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1
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1.1k
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1
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Are the rlog or VST values from DESeq2 comparable across genes?
deseq2 written 2.7 years ago by Xianjun Dong30 • updated 2.7 years ago by Ryan C. Thompson6.1k
3
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2
answers
14k
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2
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[DESEQ2] How to access the normalized data of a DESeqDataSet
deseq2 written 2.7 years ago by john40 • updated 2.7 years ago by Steve Lianoglou12k
2
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1
answer
1.8k
views
1
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interpreting LRT results DESeq2
deseq2 rna-seq lrt written 2.6 years ago by solgakar@bi.technion.ac.il50 • updated 2.6 years ago by Michael Love15k
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