1
vote
1
answer
65
views
1
answer
0
votes
1
answer
52
views
1
answer
0
votes
1
answer
40
views
1
answer
Conversion from counts to FPKM
normalization deseq2 counts fpkm fpkm() written 2 days ago by chiara.facciotto0 • updated 2 days ago by Michael Love20k
0
votes
1
answer
62
views
1
answer
2
votes
1
answer
83
views
1
answer
1
vote
1
answer
59
views
1
answer
model for LRT
deseq2 lrt written 3 days ago by takashi.k12010 • updated 3 days ago by Michael Love20k
2
votes
1
answer
40
views
1
answer
0
votes
1
answer
66
views
1
answer
DESeq2: Small treatment group, large control group
deseq2 sample size written 4 days ago by kel.chee860 • updated 4 days ago by Michael Love20k
3
votes
1
answer
99
views
1
answer
lfcShrink, interactions, and ashr
deseq2 contrast lfcshrink written 4 days ago by jurbach10 • updated 4 days ago by Michael Love20k
0
votes
1
answer
109
views
1
answer
Issue with DESeqDataSetFromMatrix
rnaseq affy deseq2 deseqdatasetfrommatrix written 5 days ago by matthew.sinton0 • updated 5 days ago by Michael Love20k
0
votes
1
answer
46
views
1
answer
When should I use betaprior=T
deseq2 written 8 days ago by andrebolerbarros0 • updated 8 days ago by Michael Love20k
0
votes
1
answer
39
views
1
answer
DGE Analysis between 3 conditions
rnaseq deseq2 written 8 days ago by evocanres0 • updated 8 days ago by Michael Love20k
0
votes
1
answer
33
views
1
answer
problem in loading Deseq2
deseq2 s4vectors written 9 days ago by roghaiyeh.safari0 • updated 9 days ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
54
views
1
answer
0
votes
1
answer
54
views
1
answer
0
votes
1
answer
49
views
1
answer
Get normalized COUNTS Deseq2
deseq2 normalized counts written 10 days ago by anaQ0 • updated 10 days ago by Steve Lianoglou12k
0
votes
1
answer
38
views
1
answer
large range of LFC in DESeq2
deseq2 lfc betaprior written 11 days ago by Mariaxi0 • updated 10 days ago by Michael Love20k
0
votes
2
answers
68
views
2
answers
2
votes
1
answer
77
views
1
answer
DESeq results gives all genes
deseq2 design matrix results written 11 days ago by evocanres0 • updated 11 days ago by Michael Love20k
0
votes
1
answer
46
views
1
answer
DESeq2 then fdrtool
deseq2 fdrtool written 12 days ago by bioinfo0 • updated 12 days ago by Michael Love20k
1
vote
1
answer
93
views
1
answer
DeSeq2 with extremely variable samples
deseq2 written 12 days ago by Helene0 • updated 12 days ago by Michael Love20k
0
votes
1
answer
49
views
1
answer
0
votes
1
answer
87
views
1
answer
DESeq2 PCA plotting
deseq2 michael love written 12 days ago by sam.far.70 • updated 12 days ago by Michael Love20k
0
votes
2
answers
60
views
2
answers
2
votes
1
answer
107
views
1
answer
Inconsistent result between limma/voom and DESeq2
rnaseq limma deseq2 voom limma-voom written 16 days ago by bharata180330 • updated 16 days ago by Gordon Smyth35k
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