15
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0
answers
4.0k
views
13 follow
0
answers
13
votes
3
answers
3.4k
views
12 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 9 months ago by Michael Love16k
9
votes
2
answers
4.6k
views
10 follow
2
answers
14
votes
6
answers
1.7k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 23 months ago by florian.noack60 • updated 3 months ago by Rory Stark2.3k
5
votes
1
answer
970
views
9 follow
1
answer
8
votes
1
answer
5.0k
views
8 follow
1
answer
DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 2.8 years ago by kmu00430 • updated 2.8 years ago by Michael Love16k
13
votes
2
answers
1.3k
views
8 follow
2
answers
10
votes
3
answers
5.5k
views
7 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 2.2 years ago by AB0 • updated 20 months ago by adam0
9
votes
2
answers
2.7k
views
7 follow
2
answers
Deseq2 error estimating size factors -- zeros in count matrix
deseq2 estimatesizefactors written 2.1 years ago by ssabri10 • updated 2.1 years ago by Michael Love16k
9
votes
1
answer
2.2k
views
7 follow
1
answer
12
votes
1
answer
572
views
7 follow
1
answer
3
votes
1
answer
1.3k
views
6 follow
1
answer
9
votes
3
answers
4.6k
views
6 follow
3
answers
DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 3.3 years ago by Darya Vanichkina90 • updated 2.1 years ago by bioprog0
3
votes
3
answers
1.7k
views
6 follow
3
answers
4
votes
4
answers
2.9k
views
6 follow
4
answers
3
votes
1
answer
404
views
6 follow
1
answer
18
votes
2
answers
2.8k
views
6 follow
2
answers
Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 16 months ago by mbeckste20 • updated 16 months ago by Simon Anders3.4k
7
votes
1
answer
585
views
6 follow
1
answer
8
votes
2
answers
307
views
6 follow
2
answers
0
votes
2
answers
659
views
5 follow
2
answers
DESeq2 : NA p values reported
deseq2 written 4.3 years ago by Abhishek Pratap160 • updated 4.3 years ago by array chip350
6
votes
1
answer
1.3k
views
5 follow
1
answer
3
votes
1
answer
1.2k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 3.7 years ago by bio200160 • updated 3.7 years ago by Michael Love16k
2
votes
3
answers
5.5k
views
5 follow
3
answers
DEseq2 time-series design.
timecourse deseq2 design written 3.3 years ago by shao80 • updated 2.8 years ago by lmolla0
7
votes
2
answers
1.6k
views
5 follow
2
answers
6
votes
3
answers
4.2k
views
5 follow
3
answers
DESeq2 baseMean values for each sample
deseq2 written 3.2 years ago by aburkha6920
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