0
votes
1
answer
37
views
1
answer
When should I use betaprior=T
deseq2 written 3 days ago by andrebolerbarros0 • updated 3 days ago by Michael Love20k
0
votes
1
answer
30
views
1
answer
DGE Analysis between 3 conditions
rnaseq deseq2 written 3 days ago by evocanres0 • updated 3 days ago by Michael Love20k
0
votes
1
answer
30
views
1
answer
problem in loading Deseq2
deseq2 s4vectors written 4 days ago by roghaiyeh.safari0 • updated 3 days ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
49
views
1
answer
0
votes
1
answer
49
views
1
answer
0
votes
1
answer
45
views
1
answer
Get normalized COUNTS Deseq2
deseq2 normalized counts written 5 days ago by anaQ0 • updated 5 days ago by Steve Lianoglou12k
0
votes
1
answer
31
views
1
answer
large range of LFC in DESeq2
deseq2 lfc betaprior written 5 days ago by Mariaxi0 • updated 5 days ago by Michael Love20k
0
votes
2
answers
62
views
2
answers
2
votes
1
answer
69
views
1
answer
DESeq results gives all genes
deseq2 design matrix results written 6 days ago by evocanres0 • updated 6 days ago by Michael Love20k
7
votes
1
answer
2.3k
views
14 follow
1
answer
1
vote
1
answer
81
views
1
answer
DeSeq2 with extremely variable samples
deseq2 written 6 days ago by Helene0 • updated 6 days ago by Michael Love20k
0
votes
1
answer
79
views
1
answer
DESeq2 PCA plotting
deseq2 michael love written 7 days ago by sam.far.70 • updated 6 days ago by Michael Love20k
0
votes
1
answer
37
views
1
answer
DESeq2 then fdrtool
deseq2 fdrtool written 6 days ago by bioinfo0 • updated 6 days ago by Michael Love20k
0
votes
1
answer
41
views
1
answer
0
votes
2
answers
50
views
2
answers
2
votes
1
answer
96
views
1
answer
Inconsistent result between limma/voom and DESeq2
rnaseq limma deseq2 voom limma-voom written 11 days ago by bharata180320 • updated 11 days ago by Gordon Smyth35k
3
votes
2
answers
67
views
2
answers
WGCNA following salmon/DESeq2
deseq2 wgcna salmon written 11 days ago by maya.kappil0 • updated 11 days ago by Peter Langfelder1.6k
2
votes
1
answer
75
views
1
answer
0
votes
2
answers
68
views
2
answers
DESeq2 for Cut&Run and differential enrichment testing
deseq2 cut&run written 11 days ago by MPerch0 • updated 11 days ago by Michael Love20k
0
votes
2
answers
64
views
2
answers
logfold shrinkage DESeq2
deseq2 written 11 days ago by sherajilir0
0
votes
1
answer
36
views
1
answer
0
votes
1
answer
80
views
1
answer
MA plot scattering pattern
deseq2 maplot written 13 days ago by avitalwasser0
1
vote
1
answer
69
views
1
answer
Do I have too many samples or are some samples causing issues?
deseq2 written 12 days ago by cmfield0 • updated 12 days ago by Michael Love20k
6
votes
2
answers
110
views
2
answers
0
votes
1
answer
81
views
1
answer
DESeq2 on mixed species samples
deseq2 written 13 days ago by swbarnes250 • updated 13 days ago by James W. MacDonald48k
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