0
votes
1
answer
10
views
1
answer
0
votes
1
answer
34
views
1
answer
DESeq2: Small treatment group, large control group
deseq2 sample size written 16 hours ago by kel.chee860 • updated 7 hours ago by Michael Love20k
0
votes
1
answer
44
views
1
answer
lfcShrink, interactions, and ashr
deseq2 contrast lfcshrink written 19 hours ago by jurbach0 • updated 19 hours ago by Michael Love20k
0
votes
1
answer
96
views
1
answer
Issue with DESeqDataSetFromMatrix
rnaseq affy deseq2 deseqdatasetfrommatrix written 1 day ago by matthew.sinton0 • updated 1 day ago by Michael Love20k
0
votes
1
answer
39
views
1
answer
When should I use betaprior=T
deseq2 written 4 days ago by andrebolerbarros0 • updated 4 days ago by Michael Love20k
0
votes
1
answer
34
views
1
answer
DGE Analysis between 3 conditions
rnaseq deseq2 written 4 days ago by evocanres0 • updated 4 days ago by Michael Love20k
0
votes
1
answer
31
views
1
answer
problem in loading Deseq2
deseq2 s4vectors written 5 days ago by roghaiyeh.safari0 • updated 5 days ago by Martin Morgan ♦♦ 22k
2
votes
1
answer
50
views
1
answer
0
votes
1
answer
52
views
1
answer
0
votes
1
answer
46
views
1
answer
Get normalized COUNTS Deseq2
deseq2 normalized counts written 6 days ago by anaQ0 • updated 6 days ago by Steve Lianoglou12k
0
votes
1
answer
32
views
1
answer
large range of LFC in DESeq2
deseq2 lfc betaprior written 6 days ago by Mariaxi0 • updated 6 days ago by Michael Love20k
0
votes
2
answers
63
views
2
answers
2
votes
1
answer
69
views
1
answer
DESeq results gives all genes
deseq2 design matrix results written 7 days ago by evocanres0 • updated 7 days ago by Michael Love20k
7
votes
1
answer
2.3k
views
14 follow
1
answer
1
vote
1
answer
84
views
1
answer
DeSeq2 with extremely variable samples
deseq2 written 8 days ago by Helene0 • updated 8 days ago by Michael Love20k
0
votes
1
answer
80
views
1
answer
DESeq2 PCA plotting
deseq2 michael love written 8 days ago by sam.far.70 • updated 8 days ago by Michael Love20k
0
votes
1
answer
37
views
1
answer
DESeq2 then fdrtool
deseq2 fdrtool written 8 days ago by bioinfo0 • updated 8 days ago by Michael Love20k
0
votes
1
answer
42
views
1
answer
0
votes
2
answers
53
views
2
answers
2
votes
1
answer
98
views
1
answer
Inconsistent result between limma/voom and DESeq2
rnaseq limma deseq2 voom limma-voom written 12 days ago by bharata180330 • updated 12 days ago by Gordon Smyth35k
3
votes
2
answers
68
views
2
answers
WGCNA following salmon/DESeq2
deseq2 wgcna salmon written 13 days ago by maya.kappil0 • updated 13 days ago by Peter Langfelder1.6k
2
votes
1
answer
77
views
1
answer
0
votes
2
answers
69
views
2
answers
DESeq2 for Cut&Run and differential enrichment testing
deseq2 cut&run written 13 days ago by MPerch0 • updated 13 days ago by Michael Love20k
0
votes
2
answers
65
views
2
answers
logfold shrinkage DESeq2
deseq2 written 13 days ago by sherajilir0
0
votes
1
answer
38
views
1
answer
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