0
votes
3
answers
1.7k
views
3
answers
DESeq2
normalization classification clustering deseq cqn deseq2 written 5.3 years ago by Wolfgang Huber13k • updated 5.2 years ago by Michael Love18k
0
votes
2
answers
877
views
2
answers
Multifactor analysis with deseq
normalization deseq deseq2 written 5.2 years ago by Michael Muratet420 • updated 5.2 years ago by Simon Anders3.5k
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votes
2
answers
727
views
2
answers
brief quesion on DESeq2
clustering genomicranges deseq2 written 5.2 years ago by Michael Love18k • updated 5.2 years ago by daniel.aguirre20
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votes
0
answers
454
views
0
answers
deseq2
deseq deseq2 written 5.2 years ago by Michael Love18k
0
votes
1
answer
888
views
1
answer
DESeq2
go deseq2 written 5.2 years ago by Guest User12k • updated 5.2 years ago by Michael Love18k
2
votes
2
answers
5.1k
views
2
answers
DESeq2 vs limma/voom: PCA completely different. How to proceed?
limma deseq2 written 5.2 years ago by Stephen Turner260 • updated 5.2 years ago by Simon Anders3.5k
0
votes
1
answer
1.6k
views
1
answer
Analyzing technical replicates with DESeq2
normalization deseq2 written 5.1 years ago by Michael Muratet420 • updated 5.1 years ago by Ryan C. Thompson6.8k
0
votes
1
answer
393
views
1
answer
0
votes
1
answer
525
views
1
answer
Fwd: Outliers in RNA seq analysis using DESeq2
deseq2 written 5.1 years ago by Emma Quinn20 • updated 5.1 years ago by Michael Love18k
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1
answer
3.0k
views
1
answer
DESeq Variance Stabilizing Transformation
clustering deseq deseq2 written 5.1 years ago by Hickman, R.J. Richard50 • updated 5.1 years ago by Michael Love18k
2
votes
1
answer
1.1k
views
1
answer
0
votes
2
answers
951
views
2
answers
using a gtf file to map reads
genomicranges deseq2 written 5.0 years ago by Sam McInturf300 • updated 5.0 years ago by Michael Lawrence10.0k
0
votes
0
answers
441
views
0
answers
2
votes
3
answers
2.1k
views
3
answers
Repeated Measures mRNA expression analysis I
limma edger deseq2 written 5.0 years ago by Charles Determan Jr140 • updated 3.5 years ago by Gordon Smyth33k
0
votes
0
answers
491
views
0
answers
0
votes
1
answer
619
views
1
answer
DESeq2 test over all timepoints?
edger deseq deseq2 written 5.0 years ago by Charles Determan Jr140 • updated 4.9 years ago by Michael Love18k
0
votes
1
answer
493
views
1
answer
DESeq2 design formula error?
deseq deseq2 written 4.9 years ago by Charles Determan Jr140 • updated 4.9 years ago by Steve Lianoglou12k
0
votes
1
answer
510
views
1
answer
Fwd: Conservative results using DEXSeq
cancer ovarian dexseq deseq2 written 4.9 years ago by Levi Waldron450 • updated 4.9 years ago by Wolfgang Huber13k
0
votes
1
answer
3.8k
views
1
answer
DESeq2 dependency hell
deseq2 written 4.9 years ago by Guest User12k • updated 4.8 years ago by James W. MacDonald46k
0
votes
1
answer
441
views
1
answer
confusing P-value of one gene
edger deseq2 written 4.8 years ago by Wolfgang Huber13k • updated 4.8 years ago by Gordon Smyth33k
0
votes
0
answers
521
views
0
answers
0
votes
3
answers
862
views
3
answers
DESeq2 : when the variable of interest is not a factor
deseq2 written 4.8 years ago by Marie Sémon50 • updated 4.8 years ago by Jose M Garcia Manteiga310
0
votes
1
answer
538
views
1
answer
eayRNASeq with Ensemble GRCh37 help
annotation organism easyrnaseq deseq2 written 4.8 years ago by Aki Hoji10 • updated 4.8 years ago by delhomme@embl.de1.2k
0
votes
1
answer
2.0k
views
1
answer
DESeq2 returning NA pvalue when counts are not zero
deseq2 written 4.7 years ago by Guest User12k • updated 4.7 years ago by Michael Love18k
0
votes
1
answer
1.6k
views
1
answer
Summarized Experiments - Combine
deseq deseq2 written 4.7 years ago by Jose M Garcia Manteiga310 • updated 4.7 years ago by Valerie Obenchain ♦♦ 6.5k
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