18
votes
0
answers
4.8k
views
19 follow
0
answers
15
votes
3
answers
6.1k
views
14 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 16 months ago by Michael Love19k
8
votes
1
answer
755
views
1
answer
Updated DESeq2 performance on highly replicated yeast RNA-seq data
deseq2 written 2.4 years ago by Michael Love19k • updated 2.4 years ago by James W. MacDonald47k
8
votes
1
answer
5.1k
views
5 follow
1
answer
10
votes
1
answer
2.1k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 3.3 years ago by Sean Davis21k • updated 12 months ago by Paul Harrison60
9
votes
1
answer
7.7k
views
10 follow
1
answer
DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 3.4 years ago by kmu00440 • updated 3.4 years ago by Michael Love19k
18
votes
2
answers
1.4k
views
2
answers
13
votes
2
answers
1.7k
views
8 follow
2
answers
14
votes
6
answers
2.4k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 2.5 years ago by florian.noack60 • updated 10 months ago by Rory Stark2.5k
14
votes
1
answer
244
views
5 follow
1
answer
6
votes
1
answer
1.5k
views
5 follow
1
answer
8
votes
2
answers
6.5k
views
2
answers
4
votes
1
answer
2.8k
views
5 follow
1
answer
interpreting LRT results DESeq2
deseq2 rna-seq lrt written 3.5 years ago by solgakar@bi.technion.ac.il60 • updated 3.5 years ago by Michael Love19k
10
votes
1
answer
1.2k
views
5 follow
1
answer
9
votes
1
answer
2.9k
views
7 follow
1
answer
18
votes
2
answers
3.7k
views
6 follow
2
answers
3
votes
2
answers
499
views
2
answers
DESeq2 with contaminating cell types
deseq2 rna-seq written 20 months ago by hughes.drew90 • updated 20 months ago by Michael Love19k
7
votes
1
answer
906
views
6 follow
1
answer
6
votes
1
answer
1.6k
views
1
answer
5
votes
1
answer
1.9k
views
9 follow
1
answer
3
votes
2
answers
819
views
2
answers
DESeqDataSetFromTximport with kallisto abundances.
deseq2 tximport written 15 months ago by ben30 • updated 11 months ago by Ming Wang0
8
votes
1
answer
338
views
1
answer
DESeq2 on NanoString Data
deseq2 nanostring written 3 months ago by casey.rimland100 • updated 3 months ago by Michael Love19k
2
votes
2
answers
6.6k
views
2
answers
DESeq2: Paired Test
deseq deseq2 written 4.5 years ago by Pankaj Agarwal100
2
votes
3
answers
3.5k
views
3
answers
DESeq2 Error in estimateSizeFactorsForMatrix
sequencing alignment deseq deseq2 written 4.3 years ago by Guest User12k • updated 3.3 years ago by gaelgarcia0
3
votes
1
answer
1.4k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 4.3 years ago by bio200160 • updated 4.3 years ago by Michael Love19k
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