15
votes
0
answers
3.8k
views
13 follow
0
answers
8
votes
1
answer
480
views
1
answer
Updated DESeq2 performance on highly replicated yeast RNA-seq data
deseq2 written 19 months ago by Michael Love15k • updated 19 months ago by James W. MacDonald45k
10
votes
3
answers
2.3k
views
8 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 6 months ago by Michael Love15k
10
votes
1
answer
1.6k
views
5 follow
1
answer
7
votes
1
answer
3.8k
views
1
answer
18
votes
2
answers
1.1k
views
2
answers
14
votes
6
answers
1.5k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 20 months ago by florian.noack60 • updated 23 days ago by Rory Stark2.1k
8
votes
1
answer
4.1k
views
8 follow
1
answer
DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 2.5 years ago by kmu00430 • updated 2.5 years ago by Michael Love15k
10
votes
1
answer
871
views
5 follow
1
answer
12
votes
2
answers
1.1k
views
6 follow
2
answers
9
votes
1
answer
1.9k
views
7 follow
1
answer
16
votes
1
answer
1.6k
views
1
answer
3
votes
2
answers
365
views
2
answers
DESeq2 with contaminating cell types
deseq2 rna-seq written 10 months ago by hughes.drew80 • updated 10 months ago by Michael Love15k
6
votes
1
answer
856
views
1
answer
5
votes
1
answer
699
views
9 follow
1
answer
3
votes
2
answers
434
views
2
answers
DESeqDataSetFromTximport with kallisto abundances.
deseq2 tximport written 5 months ago by bh12930 • updated 7 weeks ago by Ming Wang0
2
votes
2
answers
4.9k
views
2
answers
DESeq2: Paired Test
deseq deseq2 written 3.6 years ago by Pankaj Agarwal100
2
votes
3
answers
2.8k
views
3
answers
DESeq2 Error in estimateSizeFactorsForMatrix
sequencing alignment deseq deseq2 written 3.5 years ago by Guest User12k • updated 2.5 years ago by gaelgarcia0
3
votes
1
answer
1.1k
views
5 follow
1
answer
Using DESeq2: experimental design and extracting results
deseq deseq2 written 3.5 years ago by bio200160 • updated 3.5 years ago by Michael Love15k
3
votes
1
answer
1.1k
views
6 follow
1
answer
9
votes
3
answers
4.0k
views
6 follow
3
answers
DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 3.1 years ago by Darya Vanichkina90 • updated 22 months ago by bioprog0
3
votes
1
answer
10k
views
1
answer
DESeq2 output explanation
deseq deseq2 written 3.0 years ago by francesca.defilippis40 • updated 3.0 years ago by Michael Love15k
5
votes
2
answers
4.9k
views
2
answers
13
votes
1
answer
2.8k
views
1
answer
DESeq2 Model Design
deseq2 linear model model written 3.0 years ago by andrew.j.skelton73290 • updated 3.0 years ago by James W. MacDonald45k
6
votes
3
answers
3.8k
views
5 follow
3
answers
DESeq2 baseMean values for each sample
deseq2 written 3.0 years ago by aburkha6920
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