19
votes
0
answers
5.2k
views
21 follow
0
answers
16
votes
3
answers
7.1k
views
16 follow
3
answers
New function lfcShrink() in DESeq2
deseq2 written 19 months ago by Michael Love20k
8
votes
1
answer
834
views
1
answer
Updated DESeq2 performance on highly replicated yeast RNA-seq data
deseq2 written 2.6 years ago by Michael Love20k • updated 2.6 years ago by James W. MacDonald48k
8
votes
1
answer
5.5k
views
5 follow
1
answer
10
votes
1
answer
2.2k
views
5 follow
1
answer
Bootstrap confidence intervals on RNA-seq expression from Kallisto
rnaseq limma edger deseq2 voom written 3.5 years ago by Sean Davis21k • updated 14 months ago by Paul Harrison60
7
votes
1
answer
2.3k
views
14 follow
1
answer
8
votes
1
answer
20k
views
8 follow
1
answer
DESeq2 output explanation
deseq deseq2 written 4.1 years ago by francesca.defilippis60 • updated 4.1 years ago by Michael Love20k
10
votes
2
answers
6.9k
views
6 follow
2
answers
9
votes
1
answer
8.7k
views
10 follow
1
answer
DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 3.6 years ago by kmu00440 • updated 3.6 years ago by Michael Love20k
18
votes
2
answers
1.5k
views
2
answers
13
votes
2
answers
1.9k
views
8 follow
2
answers
14
votes
6
answers
2.6k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 2.7 years ago by florian.noack60 • updated 13 months ago by Rory Stark2.6k
15
votes
1
answer
395
views
5 follow
1
answer
6
votes
1
answer
1.6k
views
5 follow
1
answer
4
votes
1
answer
3.6k
views
1
answer
11
votes
2
answers
5.9k
views
11 follow
2
answers
4
votes
1
answer
3.0k
views
5 follow
1
answer
interpreting LRT results DESeq2
deseq2 rna-seq lrt written 3.7 years ago by solgakar@bi.technion.ac.il60 • updated 3.7 years ago by Michael Love20k
10
votes
1
answer
1.4k
views
5 follow
1
answer
9
votes
1
answer
3.1k
views
7 follow
1
answer
18
votes
2
answers
4.3k
views
6 follow
2
answers
3
votes
2
answers
550
views
2
answers
DESeq2 with contaminating cell types
deseq2 rna-seq written 23 months ago by hughes.drew90 • updated 23 months ago by Michael Love20k
7
votes
1
answer
1.0k
views
6 follow
1
answer
6
votes
1
answer
1.8k
views
1
answer
3
votes
2
answers
925
views
2
answers
DESeqDataSetFromTximport with kallisto abundances.
deseq2 tximport written 18 months ago by ben30 • updated 14 months ago by Ming Wang0
8
votes
1
answer
525
views
1
answer
DESeq2 on NanoString Data
deseq2 nanostring written 6 months ago by casey.rimland100 • updated 6 months ago by Michael Love20k
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