Showing: deseq2reset
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New function lfcShrink() in DESeq2
deseq2 written 2.5 years ago by Michael Love25k • updated 10 weeks ago by Micheal Stark0
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DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 4.4 years ago by kmu00440 • updated 4.4 years ago by Michael Love25k
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DESeq2 - paired sample, interaction and fold change
deseq2 written 5.4 years ago by samuel collombet140 • updated 5.4 years ago by Michael Love25k
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Using DESeq2: experimental design and extracting results
deseq deseq2 written 5.4 years ago by bio200160 • updated 5.4 years ago by Michael Love25k
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DESeq2 output explanation
deseq deseq2 written 4.9 years ago by francesca.defilippis60 • updated 4.9 years ago by Michael Love25k
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interpreting LRT results DESeq2
deseq2 rna-seq lrt written 4.6 years ago by solgakar@bi.technion.ac.il60 • updated 4.6 years ago by Michael Love25k
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DESeq2 results with RUVSeq values
deseq2 ruvseq sizefacotrs written 4.4 years ago by Assa Yeroslaviz1.4k • updated 4.4 years ago by davide risso830
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DeSeq2 - hill–shaped histogram of pvalues
deseq2 pvalue histogram written 4.2 years ago by deut1370 • updated 4.2 years ago by Bernd Klaus560
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Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 3.9 years ago by AB70 • updated 3.4 years ago by adam0
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DESeq2 and shrinkage of log2 fold changes
deseq2 written 3.7 years ago by ribioinfo90 • updated 3.7 years ago by Michael Love25k
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ribosome profiling and rna seq data with Deseq2 package
deseq2 written 3.6 years ago by ecekartal8920 • updated 3.6 years ago by Bernd Klaus560
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 3.6 years ago by florian.noack60 • updated 24 months ago by Rory Stark2.9k
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Pre-processing of RNA-Seq data for WGCNA and DGE
deseq2 wgcna voom rna-seq removebatcheffect() written 3.1 years ago by gokce.ouz60 • updated 3.1 years ago by Peter Langfelder2.2k
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Incredibly high/low foldChange
deseq2 written 20 months ago by jovel_juan10
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Question about PCA and transformed data in DESeq2
deseq2 written 6.0 years ago by amandine.fournier@chu-lyon.fr80 • updated 6.0 years ago by Michael Love25k
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