Showing: deseq2reset
20
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0
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5.8k
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23 follow
0
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17
votes
3
answers
8.8k
views
18 follow
3
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New function lfcShrink() in DESeq2
deseq2 written 2.0 years ago by Michael Love23k
14
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2
answers
6.5k
views
14 follow
2
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7
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1
answer
3.3k
views
14 follow
1
answer
16
votes
3
answers
13k
views
11 follow
3
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Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 3.4 years ago by AB40 • updated 3.0 years ago by adam0
16
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6
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3.0k
views
11 follow
6
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 3.2 years ago by florian.noack60 • updated 18 months ago by Rory Stark2.8k
9
votes
1
answer
11k
views
10 follow
1
answer
DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 4.0 years ago by kmu00440 • updated 4.0 years ago by Michael Love23k
8
votes
1
answer
24k
views
8 follow
1
answer
DESeq2 output explanation
deseq deseq2 written 4.5 years ago by francesca.defilippis60 • updated 4.5 years ago by Michael Love23k
11
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2
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7.6k
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8 follow
2
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12
votes
2
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14k
views
8 follow
2
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deseq2 filter the low counts
deseq2 lowcount written 4.2 years ago by aristotele_m30 • updated 2.6 years ago by pkachroo10
13
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2
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2.1k
views
8 follow
2
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21
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2
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5.5k
views
8 follow
2
answers
21
votes
2
answers
5.2k
views
8 follow
2
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Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 2.6 years ago by mbeckste20 • updated 2.6 years ago by Simon Anders3.5k
9
votes
2
answers
4.6k
views
7 follow
2
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Deseq2 error estimating size factors -- zeros in count matrix
deseq2 estimatesizefactors written 3.4 years ago by ssabri20 • updated 3.4 years ago by Michael Love23k
9
votes
1
answer
3.6k
views
7 follow
1
answer
9
votes
1
answer
8.3k
views
7 follow
1
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DESeq2 and shrinkage of log2 fold changes
deseq2 written 3.3 years ago by riccardo70 • updated 3.3 years ago by Michael Love23k
12
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1
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969
views
7 follow
1
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8
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2
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1.2k
views
7 follow
2
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4
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2
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503
views
7 follow
2
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Incredibly high/low foldChange
deseq2 written 14 months ago by jovel_juan10
3
votes
1
answer
2.2k
views
6 follow
1
answer
10
votes
3
answers
7.9k
views
6 follow
3
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DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 4.6 years ago by Darya Vanichkina110 • updated 3.3 years ago by bioprog0
2
votes
3
answers
9.8k
views
6 follow
3
answers
DEseq2 time-series design.
timecourse deseq2 design written 4.5 years ago by shao80 • updated 4.0 years ago by lmolla10
9
votes
3
answers
6.3k
views
6 follow
3
answers
DESeq2 baseMean values for each sample
deseq2 written 4.4 years ago by aburkha6920
5
votes
2
answers
29k
views
6 follow
2
answers
[DESEQ2] How to access the normalized data of a DESeqDataSet
deseq2 written 4.2 years ago by john60 • updated 4.2 years ago by Steve Lianoglou12k
3
votes
3
answers
2.5k
views
6 follow
3
answers
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