Showing: deseq2reset
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New function lfcShrink() in DESeq2
deseq2 written 2.5 years ago by Michael Love25k • updated 10 weeks ago by Micheal Stark0
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28
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13 follow
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Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 3.9 years ago by AB70 • updated 3.4 years ago by adam0
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 3.6 years ago by florian.noack60 • updated 24 months ago by Rory Stark2.9k
9
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10 follow
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DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 4.4 years ago by kmu00440 • updated 4.4 years ago by Michael Love25k
12
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DESeq2 and shrinkage of log2 fold changes
deseq2 written 3.7 years ago by ribioinfo90 • updated 3.7 years ago by Michael Love25k
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13
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15
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9 follow
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deseq2 filter the low counts
deseq2 lowcount written 4.7 years ago by aristotele_m30 • updated 3.1 years ago by pkachroo10
13
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9 follow
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2
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8 follow
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DEseq2 time-series design.
timecourse deseq2 design written 5.0 years ago by shao80 • updated 3 months ago by simon baldwin0
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8 follow
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DESeq2 output explanation
deseq deseq2 written 4.9 years ago by francesca.defilippis60 • updated 4.9 years ago by Michael Love25k
11
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Pre-processing of RNA-Seq data for WGCNA and DGE
deseq2 wgcna voom rna-seq removebatcheffect() written 3.1 years ago by gokce.ouz60 • updated 3.1 years ago by Peter Langfelder2.2k
21
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Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 3.0 years ago by mbeckste20 • updated 3.0 years ago by Simon Anders3.6k
15
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3
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1.4k
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8 follow
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DESeq2 1.20.0 lfcshrink function
deseq2 differential expression logfoldchange lfcthreshold lfcshrink written 16 months ago by emi.sch20 • updated 3 months ago by yusuf.zhc0
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DESeq2 baseMean values for each sample
deseq2 written 4.9 years ago by aburkha6920
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[DESEQ2] How to access the normalized data of a DESeqDataSet
deseq2 written 4.6 years ago by john60 • updated 4.6 years ago by Steve Lianoglou12k
9
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Deseq2 error estimating size factors -- zeros in count matrix
deseq2 estimatesizefactors written 3.8 years ago by ssabri20 • updated 3.8 years ago by Michael Love25k
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6
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866
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8
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1.6k
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4
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Incredibly high/low foldChange
deseq2 written 20 months ago by jovel_juan10
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