Showing: deseq2reset
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23 follow
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18
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3
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20 follow
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New function lfcShrink() in DESeq2
deseq2 written 2.2 years ago by Michael Love24k
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24
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14k
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Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 3.6 years ago by AB70 • updated 3.1 years ago by adam0
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11 follow
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Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 3.3 years ago by florian.noack60 • updated 20 months ago by Rory Stark2.8k
9
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11k
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10 follow
1
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DESEq2 comparison with mulitple cell types under 2 conditions
deseq2 multiple factor design written 4.2 years ago by kmu00440 • updated 4.2 years ago by Michael Love24k
13
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9 follow
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10k
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8 follow
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DEseq2 time-series design.
timecourse deseq2 design written 4.7 years ago by shao80 • updated 20 days ago by simon baldwin0
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25k
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8 follow
1
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DESeq2 output explanation
deseq deseq2 written 4.7 years ago by francesca.defilippis60 • updated 4.7 years ago by Michael Love24k
12
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15k
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8 follow
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deseq2 filter the low counts
deseq2 lowcount written 4.4 years ago by aristotele_m30 • updated 2.8 years ago by pkachroo10
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22
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6.0k
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8 follow
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21
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5.6k
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8 follow
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Usability of ERCC spike-ins in standard RNAseq experiments
rnaseq deseq2 ercc written 2.8 years ago by mbeckste20 • updated 2.8 years ago by Simon Anders3.5k
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6.5k
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7 follow
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DESeq2 baseMean values for each sample
deseq2 written 4.6 years ago by aburkha6920
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2
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4.8k
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7 follow
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Deseq2 error estimating size factors -- zeros in count matrix
deseq2 estimatesizefactors written 3.5 years ago by ssabri20 • updated 3.5 years ago by Michael Love24k
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3.7k
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7 follow
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9
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8.9k
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7 follow
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DESeq2 and shrinkage of log2 fold changes
deseq2 written 3.5 years ago by ribioinfo70 • updated 3.5 years ago by Michael Love24k
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1.0k
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7 follow
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9
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3.4k
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Pre-processing of RNA-Seq data for WGCNA and DGE
deseq2 wgcna voom rna-seq removebatcheffect() written 2.8 years ago by gokce.ouz60 • updated 2.8 years ago by Peter Langfelder2.1k
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1.4k
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7 follow
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4
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551
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7 follow
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Incredibly high/low foldChange
deseq2 written 16 months ago by jovel_juan10
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2.3k
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6 follow
1
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10
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3
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8.2k
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6 follow
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DESeq2: add annotations (from data frame) to DESeqDataSet
annotation deseq2 granges written 4.7 years ago by Darya Vanichkina110 • updated 3.5 years ago by bioprog0
5
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31k
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6 follow
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[DESEQ2] How to access the normalized data of a DESeqDataSet
deseq2 written 4.3 years ago by john60 • updated 4.3 years ago by Steve Lianoglou12k
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