Showing: deseq2reset
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DEseq2 loading library problem
deseq2 written 2 days ago by shilabr0 • updated 2 days ago by Martin Morgan ♦♦ 23k
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DESeq2 installation issue
deseq2 written 2 days ago by eric.trezel0 • updated 2 days ago by Martin Morgan ♦♦ 23k
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DESeq2 analysis with multiple factors
deseq2 deg multiplefactors written 2 days ago by yura.song0 • updated 2 days ago by Steve Lianoglou12k
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write.table of DESeq2 results broken down by LFC
deseq2 written 3 days ago by rbronste60 • updated 3 days ago by Michael Love25k
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Differential gene expression analysis
deseq2 written 3 days ago by rthapa0 • updated 3 days ago by Michael Love25k
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Difference in PCA variance calculation in DESeq2
deseq2 hclust pca written 3 days ago by ag1805x20 • updated 3 days ago by Michael Love25k
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tximeta link to transcriptome
deseq2 written 4 days ago by eric.blanc0 • updated 4 days ago by Michael Love25k
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Paired t-test with DESeq2
deseq2 written 11 days ago by Mozart10 • updated 10 days ago by swbarnes2330
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DESeq2 using many cores despite parallel = FALSE
deseq2 parallel written 11 days ago by symbiologist0 • updated 11 days ago by Michael Love25k
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Modelling a multiplicative batch effect with DESeq2
deseq2 combat batch-effects written 13 days ago by Samuel0 • updated 12 days ago by Michael Love25k
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DESeq2 VS edgeR DEG results different in analysis same data
edger deseq2 written 13 days ago by 159580212900 • updated 13 days ago by Gordon Smyth38k
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Combining RSEM Files with dif row # for tximport
rnaseq deseq2 tximport written 14 days ago by venura0 • updated 14 days ago by Michael Love25k
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Batch effects between different sequencing runs
deseq2 batchcorrection written 16 days ago by A40 • updated 16 days ago by swbarnes2330
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DESeq2 lfcshrink generate 0 svalues
deseq2 written 16 days ago by corentin.lyon0 • updated 16 days ago by Michael Love25k
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SVA for repeated measures design
sva deseq2 repeated measures written 25 days ago by sara.blocquiaux0 • updated 17 days ago by Robert Castelo2.3k
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DeSeq2 Design (A-B)-(C-D)
limma deseq2 written 18 days ago by Jonathan.allen10 • updated 17 days ago by Gordon Smyth38k
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Using RUVs on Deseq2 but clustering still seems wrong
deseq2 ruv batch written 17 days ago by r.tom0 • updated 17 days ago by Michael Love25k
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DESeq2 indirect batch effect removal
deseq2 batch written 19 days ago by Nicolas Huber0 • updated 18 days ago by Michael Love25k
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