Showing: deseq2 • reset
Search
3
votes
1
answer
37
views
1
answer
normalization of RNA-seq data after over-expressing the transcription factors
limma edger deseq2 voom written 9 hours ago by Bogdan • 560 • updated 1 hour ago by Aaron Lun • 24k
0
votes
0
answers
11
views
0
answers
DESeq2 analysis for low RNA input
deseq2 written 8 hours ago by capricygcapricyg • 0
3
votes
1
answer
25
views
1
answer
TMM Normalization: DESeqDataSet: some values in assay are negative
normalization deseq deseq2 written 11 hours ago by neekonsu • 0 • updated 11 hours ago by Simon Anders • 3.6k
0
votes
1
answer
29
views
1
answer
Incorrect DESeq2 Output
deseq2 written 13 hours ago by umajs • 0 • updated 11 hours ago by Michael Love ♦ 24k
0
votes
1
answer
35
views
1
answer
DESeq2: Contrasts in multifactor design with interaction terms
deseq2 R written 13 hours ago by arielle • 0
0
votes
1
answer
33
views
1
answer
Contrast vs relevel (DESEq2)
rnaseq deseq2 written 15 hours ago by Merlin • 10 • updated 15 hours ago by Michael Love ♦ 24k
0
votes
1
answer
35
views
1
answer
DESeq2 more than 2 groups comparison
deseq2 written 18 hours ago by sstankovic • 0 • updated 16 hours ago by Michael Love ♦ 24k
2
votes
1
answer
39
views
1
answer
collapseReplicates changes the order of the original dataframe in DESeq2
deseq2 collapsereplicates written 17 hours ago by gtechbio • 0 • updated 16 hours ago by Michael Love ♦ 24k
0
votes
1
answer
54
views
1
answer
DEseq2 ncol(countData) == nrow(colData) is not TRUE Error
deseq2 written 1 day ago by trumbia • 0
0
votes
1
answer
40
views
1
answer
deseq2 correction batch effect without design
deseq2 batch effect written 1 day ago by mdidish • 0 • updated 1 day ago by swbarnes2 • 220
1
vote
1
answer
43
views
1
answer
Deciphering Wilkinson Notation and Predictor Variables
deseq2 written 3 days ago by dennism9251 • 0 • updated 3 days ago by Michael Love ♦ 24k
0
votes
2
answers
38
views
2
answers
DESeq2 "Not full rank" Error
deseq2 written 4 days ago by DakJackson • 0 • updated 3 days ago by swbarnes2 • 220
1
vote
1
answer
61
views
1
answer
log2foldchange vs density plot from likelihood and posterior
deseq2 written 3 days ago by n.naharfancy • 0 • updated 3 days ago by Michael Love ♦ 24k
5
votes
1
answer
155
views
1
answer
DESeq2 logfoldchange and interaction in model
deseq2 R rna-seq logfoldchange written 6 weeks ago by pierre.marin • 0
0
votes
1
answer
43
views
1
answer
RNASeq biplot variables and samples
rnaseq deseq2 written 4 days ago by ecg1g15 • 0 • updated 4 days ago by Michael Love ♦ 24k
0
votes
1
answer
49
views
1
answer
RNA-seq time course analysis with only one experimental condition
cancer deseq2 rna-seq time-series written 4 days ago by mah19 • 0
1
vote
2
answers
87
views
2
answers
Comparing two different sequencing method by DEseq2
deseq2 written 6 days ago by n.naharfancy • 0 • updated 6 days ago by swbarnes2 • 220
1
vote
1
answer
69
views
1
answer
DESeq2: name and contrast arguments return partially different results under specific circumstances -- bug?
deseq2 written 7 days ago by Vincent de Bakker • 0 • updated 7 days ago by Michael Love ♦ 24k
1
vote
1
answer
59
views
1
answer
DESeq2 formula to include batch AND patient, and condition ?
deseq2 written 9 days ago by sxv • 0 • updated 8 days ago by Michael Love ♦ 24k
0
votes
1
answer
50
views
1
answer
File type for DEseq using ATACseq data
deseq2 written 8 days ago by mw848 • 0 • updated 8 days ago by Michael Love ♦ 24k
0
votes
2
answers
93
views
2
answers
DESeq2 error on analyzing microbiome data
sequencing microbiome deseq2 written 11 days ago by zhigang.li • 0
0
votes
1
answer
50
views
1
answer
Retrieving Normalized Groups from Results()
deseq2 written 10 days ago by dennism9251 • 0 • updated 10 days ago by Michael Love ♦ 24k
0
votes
1
answer
52
views
1
answer
Should I subsample an over-clustered sample for DESeq2?
deseq2 written 10 days ago by russell.stewart.j • 0 • updated 10 days ago by Michael Love ♦ 24k
5
votes
2
answers
188
views
2
answers
Difference of difference, paired design
limma edger deseq2 written 14 days ago by Bloodgas • 0 • updated 11 days ago by swbarnes2 • 220
0
votes
2
answers
64
views
2
answers
Creating the correct design
deseq2 written 13 days ago by skamboj • 0 • updated 12 days ago by Michael Love ♦ 24k
<prev • 665 results • page 1 of 27 • next >
Recent...
Replies
Votes
Awards • All »
Locations • All »
  • Walter and Eliza Hall Institute of Medical Research, Melbourne, Australia, 10 minutes ago
  • Switzerland, 11 minutes ago
  • United States, 30 minutes ago
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 231 users visited in the last hour