Showing: deseq2reset
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New function lfcShrink() in DESeq2
deseq2 written 2.3 years ago by Michael Love24k • updated 4 days ago by Micheal Stark0
5
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1
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140
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1
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RNA-seq normalization without filtering
rnaseq normalization edger deseq2 written 9 days ago by Lin40 • updated 9 days ago by Steve Lianoglou12k
3
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1
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139
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1
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Questions for ResultsNames() and the Contrast function
deseq2 written 25 days ago by dennism92510 • updated 25 days ago by Michael Love24k
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1
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139
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1
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DESeq2 for multiple groups
deseq2 written 18 days ago by ijvechetti0 • updated 18 days ago by Steve Lianoglou12k
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126
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3
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2
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119
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RNAseq and heatmap
deseq2 rna-seq heatmap written 24 days ago by Merlin 10 • updated 24 days ago by Michael Love24k
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TMM Normalization: DESeqDataSet: some values in assay are negative
normalization deseq deseq2 written 26 days ago by neekonsu0 • updated 12 days ago by wunderl20
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Importance of Order in Design Formula
deseq2 written 26 days ago by dennism92510 • updated 26 days ago by swbarnes2240
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106
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0
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What can I do if I only have TPM but not raw counts data?
deseq2 written 25 days ago by Di Yang0 • updated 25 days ago by Steve Lianoglou12k
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1
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100
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1
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deseq2 correction batch effect without design
deseq2 batch effect written 27 days ago by mdidish0 • updated 27 days ago by swbarnes2240
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98
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2
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3
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understanding DEseq2 interactions before/after releveling the baseline
deseq2 written 12 days ago by assaf www140 • updated 12 days ago by Michael Love24k
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92
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DESeq2: Error when correcting batch effect
deseq2 batch effect written 25 days ago by Rimma0 • updated 25 days ago by Michael Love24k
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91
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1
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Identifying cell line-independent DEG in a time series (DESeq2)
deseq2 written 17 days ago by jhnwphillips0 • updated 17 days ago by Michael Love24k
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89
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deseq2 formula design
deseq2 written 24 days ago by nabiyogesh0 • updated 24 days ago by swbarnes2240
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