Showing: deseq2reset
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DeSeq2 Design (A-B)-(C-D)
limma deseq2 written 17 days ago by Jonathan.allen10 • updated 17 days ago by Gordon Smyth38k
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DESeq2 very high log2foldchange values
deseq2 written 28 days ago by barakdror0 • updated 27 days ago by Michael Love25k
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high lcfSE for genes with zero counts in the majority of conditions
deseq2 written 27 days ago by Fred0 • updated 27 days ago by Michael Love25k
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delete samples from summarizedExperiment
deseq2 written 25 days ago by annkolman780 • updated 25 days ago by James W. MacDonald51k
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DESeq2: Internal reference and multiple comparisons
deseq2 written 25 days ago by yermatudela0 • updated 24 days ago by sara.blocquiaux0
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SVA for repeated measures design
sva deseq2 repeated measures written 24 days ago by sara.blocquiaux0 • updated 17 days ago by Robert Castelo2.3k
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DESeq Normalisation, miRNASeq
normalization deseq2 mirnaseq written 24 days ago by anshulmbi0 • updated 23 days ago by Michael Love25k
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Differential expression analyses
normalization deseq2 written 24 days ago by simaomc.bio0 • updated 23 days ago by Michael Love25k
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DESeq2 indirect batch effect removal
deseq2 batch written 19 days ago by Nicolas Huber0 • updated 17 days ago by Michael Love25k
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Deseq metadata bug on repeat runs with parallel
deseq2 written 18 days ago by rbutler0 • updated 18 days ago by Michael Love25k
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Using RUVs on Deseq2 but clustering still seems wrong
deseq2 ruv batch written 17 days ago by r.tom0 • updated 17 days ago by Michael Love25k
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DESeq2 lfcshrink generate 0 svalues
deseq2 written 16 days ago by corentin.lyon0 • updated 15 days ago by Michael Love25k
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Batch effects between different sequencing runs
deseq2 batchcorrection written 15 days ago by A40 • updated 15 days ago by swbarnes2330
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Combining RSEM Files with dif row # for tximport
rnaseq deseq2 tximport written 13 days ago by venura0 • updated 13 days ago by Michael Love25k
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DESeq2 VS edgeR DEG results different in analysis same data
edger deseq2 written 13 days ago by 159580212900 • updated 13 days ago by Gordon Smyth38k
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Modelling a multiplicative batch effect with DESeq2
deseq2 combat batch-effects written 12 days ago by Samuel0 • updated 12 days ago by Michael Love25k
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