Showing: diffbindreset
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DEseq2 for differential binding analysis ChIP seq
chipseq diffbind deseq2 csaw greylistchip written 11 months ago by Yonatan Amzaleg0 • updated 11 months ago by Michael Love26k
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DiffBind for ATAC-seq -- bFullLibrarySize parameter
diffbind atac written 9 months ago by paz20050 • updated 9 months ago by Rory Stark3.0k
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DiffBind dba.count error pv$merge(bed): attempt to apply non-function
diffbind written 6 months ago by chadnewton0 • updated 3 months ago by Rory Stark3.0k
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Can I input peak files from Genrich as input reads in DiffBind?
diffbind genrich written 8 months ago by gsenevirathne0 • updated 8 months ago by Rory Stark3.0k
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How to get all possible comparisons in DiffBind
diffbind written 11 months ago by bony.dekumar0 • updated 11 months ago by James W. MacDonald52k
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diffBind report Fold scale
diffbind fold change written 11 months ago by joseluis.ruiz0 • updated 11 months ago by Rory Stark3.0k
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254
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DiffBind peaks input file format
diffbind macs2 written 10 months ago by Anna0 • updated 9 months ago by Rory Stark3.0k
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244
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how to retrieve binding affinity matrix in diffbind
diffbind dba.count written 9 months ago by hamaor0 • updated 9 months ago by Rory Stark3.0k
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DiffBind - Counting reads - counts not found
genetics diffbind differential analysis #chip-seq written 9 months ago by ryclb220 • updated 9 months ago by Rory Stark3.0k
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0
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DiffBind with highly variable FRiP (Fraction Reads in Peaks)
diffbind written 9 months ago by GFM20 • updated 9 months ago by Rory Stark3.0k
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Using DiffBind with only a counts table?
diffbind counts atac differential analysis atacseq written 9 months ago by pgontarz10 • updated 8 months ago by Rory Stark3.0k
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Handing duplicates in DiffBind
diffbind dba.count bremoveduplicates busesummarizeoverlaps written 9 months ago by loretta0 • updated 9 months ago by Rory Stark3.0k
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Reading peaks from MACS2 with DiffBind
diffbind chip-seq peak calling written 6 months ago by aviv.de-morgan0 • updated 6 months ago by Rory Stark3.0k
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Diffbind plotting options
diffbind written 9 months ago by Helene0 • updated 9 months ago by Rory Stark3.0k
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Diffbind multiple groups
diffbind written 9 months ago by Vince Schulz60
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diffbind dba object subset peak regions
diffbind written 4 months ago by Vince Schulz60 • updated 3 months ago by Rory Stark3.0k
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Diffbind: Using bigwig tracks in place of bam files
diffbind written 8 months ago by ram.n.krishnan0 • updated 8 months ago by Gord Brown590
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DiffBind dba error
diffbind error R dba written 6 months ago by annika-helverson0 • updated 3 months ago by Rory Stark3.0k
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