Showing: differential expressionreset
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RPKM, CPM and TMM
rnaseq edger differential expression written 4.2 years ago by Pauly Lin90 • updated 4.2 years ago by Aaron Lun24k
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order of covariates for GLM with edgeR
edger differential expression glm covariate batch effect written 3.8 years ago by aec40 • updated 3.7 years ago by Gordon Smyth38k
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DESeq2/SAMSeq - analysing subset of genes from RNASeq dataset
deseq2 differential expression samseq written 3.5 years ago by aylj0 • updated 3.5 years ago by Michael Love25k
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Targeted RNASeq/CaptureSeq DE Analysis
edger deseq2 rna differential expression written 3.0 years ago by tyssowski0 • updated 3.0 years ago by Aaron Lun24k
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limma voom for single factor
limma differential expression voom written 2.1 years ago by bumbum0 • updated 2.1 years ago by Gordon Smyth38k
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Differential expression analysis desgin
limma edger deseq2 differential expression interactions written 23 months ago by kendralec10 • updated 23 months ago by Gordon Smyth38k
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Interpretation of p-value plot
limma differential expression p values written 16 months ago by karlien.springael0 • updated 16 months ago by Gordon Smyth38k
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Get the countsFromAbundance as limma input
limma deseq2 differential expression tximport written 12 months ago by Darklings0 • updated 12 months ago by Gordon Smyth38k
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How does limma calculate the log2fc?
limma differential expression time-course analysis written 4 months ago by mcfarn10 • updated 4 months ago by Gordon Smyth38k
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