5
votes
1
answer
4.0k
views
5 follow
1
answer
Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 3.3 years ago by François Lefebvre50 • updated 3.3 years ago by Alyssa Frazee170
12
votes
1
answer
1.2k
views
7 follow
1
answer
edgeR glmLRT with test="F"?
edger differential expression dge written 2.9 years ago by Ryan C. Thompson6.5k • updated 2.9 years ago by Aaron Lun19k
3
votes
1
answer
434
views
1
answer
6
votes
1
answer
655
views
1
answer
3
votes
1
answer
183
views
1
answer
3
votes
1
answer
2.3k
views
1
answer
4
votes
1
answer
956
views
1
answer
Two-class unpaired test using LIMMA
limma differential expression sam written 3.4 years ago by Bade310 • updated 3.4 years ago by James W. MacDonald46k
1
vote
1
answer
1.1k
views
1
answer
1
vote
1
answer
998
views
1
answer
Deconvolution RNA-Seq data
differential expression rna-seq written 3.2 years ago by carleshf10 • updated 3.2 years ago by James W. MacDonald46k
0
votes
1
answer
552
views
1
answer
0
votes
0
answers
465
views
0
answers
0
votes
0
answers
413
views
0
answers
6
votes
3
answers
1.2k
views
3
answers
0
votes
2
answers
477
views
2
answers
1
vote
1
answer
441
views
1
answer
0
votes
1
answer
373
views
1
answer
Find differentially expressed values
edger differential expression differential gene expression written 3.0 years ago by Safana0 • updated 3.0 years ago by Gordon Smyth33k
4
votes
2
answers
497
views
2
answers
Differential expression on codelink data
codelink R differential expression written 2.9 years ago by Agaz Hussain Wani260 • updated 2.9 years ago by Diego Diez730
1
vote
1
answer
539
views
1
answer
2
votes
1
answer
557
views
1
answer
Codelink differential expression and annotation
hwgcod codelink R differential expression written 2.9 years ago by Agaz Hussain Wani260 • updated 2.9 years ago by Diego Diez730
6
votes
2
answers
547
views
2
answers
Can i set a path for readCodlinkSet()
codelink R differential expression written 2.9 years ago by Agaz Hussain Wani260 • updated 2.8 years ago by Diego Diez730
1
vote
1
answer
607
views
1
answer
Passing contrasts as a vector gives an error
limma R differential expression written 2.9 years ago by Agaz Hussain Wani260 • updated 2.9 years ago by Gordon Smyth33k
4
votes
1
answer
572
views
1
answer
10
votes
1
answer
12k
views
1
answer
RPKM, CPM and TMM
rnaseq edger differential expression written 2.8 years ago by Pauly Lin80 • updated 2.8 years ago by Aaron Lun19k
2
votes
1
answer
2.6k
views
1
answer
0
votes
0
answers
385
views
0
answers
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