12
votes
1
answer
1.3k
views
7 follow
1
answer
edgeR glmLRT with test="F"?
edger differential expression dge written 3.0 years ago by Ryan C. Thompson6.8k • updated 3.0 years ago by Aaron Lun19k
5
votes
1
answer
4.2k
views
5 follow
1
answer
Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 3.4 years ago by Fran├žois Lefebvre50 • updated 3.4 years ago by Alyssa Frazee170
1
vote
2
answers
2.4k
views
2
answers
Ballgown up and down regulated genes
differential expression ballgown written 2.4 years ago by psbpedrobarbosa0 • updated 14 months ago by kapeelc0
3
votes
1
answer
519
views
1
answer
6
votes
1
answer
722
views
1
answer
3
votes
1
answer
206
views
1
answer
1
vote
3
answers
327
views
3
answers
1
vote
1
answer
309
views
1
answer
3
votes
2
answers
260
views
2
answers
2
votes
1
answer
189
views
1
answer
Protein differential Expression analysis
proteomics differential expression written 5 months ago by cardin.julie0 • updated 5 months ago by Laurent Gatto980
7
votes
1
answer
236
views
1
answer
Analysis of pathways using edgeR
rnaseq edger kegg differential expression written 3 months ago by fawazfebin30 • updated 3 months ago by Gordon Smyth33k
1
vote
1
answer
1.1k
views
1
answer
Deconvolution RNA-Seq data
differential expression rna-seq written 3.3 years ago by carleshf10 • updated 3.3 years ago by James W. MacDonald46k
0
votes
0
answers
502
views
0
answers
6
votes
3
answers
1.2k
views
3
answers
0
votes
1
answer
380
views
1
answer
Find differentially expressed values
edger differential expression differential gene expression written 3.1 years ago by Safana0 • updated 3.1 years ago by Gordon Smyth33k
4
votes
2
answers
509
views
2
answers
Differential expression on codelink data
codelink R differential expression written 3.1 years ago by Agaz Hussain Wani260 • updated 3.1 years ago by Diego Diez730
1
vote
1
answer
565
views
1
answer
1
vote
1
answer
628
views
1
answer
Passing contrasts as a vector gives an error
limma R differential expression written 3.0 years ago by Agaz Hussain Wani260 • updated 3.0 years ago by Gordon Smyth33k
4
votes
1
answer
620
views
1
answer
10
votes
1
answer
13k
views
1
answer
RPKM, CPM and TMM
rnaseq edger differential expression written 3.0 years ago by Pauly Lin80 • updated 3.0 years ago by Aaron Lun19k
2
votes
1
answer
2.7k
views
1
answer
3
votes
3
answers
823
views
3
answers
2
votes
1
answer
923
views
1
answer
order of covariates for GLM with edgeR
edger differential expression glm covariate batch effect written 2.5 years ago by aec40 • updated 2.5 years ago by Gordon Smyth33k
3
votes
1
answer
445
views
1
answer
2
votes
2
answers
619
views
2
answers
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