11
votes
1
answer
939
views
6 follow
1
answer
edgeR glmLRT with test="F"?
edger differential expression dge written 2.5 years ago by Ryan C. Thompson6.1k • updated 2.5 years ago by Aaron Lun17k
6
votes
1
answer
451
views
1
answer
3
votes
1
answer
3.3k
views
1
answer
Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 2.8 years ago by François Lefebvre40 • updated 2.8 years ago by Alyssa Frazee110
3
votes
2
answers
143
views
2
answers
1
vote
1
answer
801
views
1
answer
Deconvolution RNA-Seq data
differential expression rna-seq written 2.7 years ago by carleshf10 • updated 2.7 years ago by James W. MacDonald45k
0
votes
0
answers
384
views
0
answers
6
votes
3
answers
985
views
3
answers
0
votes
1
answer
339
views
1
answer
Find differentially expressed values
edger differential expression differential gene expression written 2.5 years ago by Safana0 • updated 2.5 years ago by Gordon Smyth32k
4
votes
2
answers
449
views
2
answers
Differential expression on codelink data
codelink R differential expression written 2.5 years ago by Agaz Hussain Wani240 • updated 2.5 years ago by Diego Diez700
1
vote
1
answer
474
views
1
answer
1
vote
1
answer
545
views
1
answer
Passing contrasts as a vector gives an error
limma R differential expression written 2.4 years ago by Agaz Hussain Wani240 • updated 2.4 years ago by Gordon Smyth32k
4
votes
1
answer
475
views
1
answer
2
votes
1
answer
2.1k
views
1
answer
3
votes
3
answers
562
views
3
answers
2
votes
1
answer
700
views
1
answer
order of covariates for GLM with edgeR
edger differential expression glm covariate batch effect written 23 months ago by aec30 • updated 23 months ago by Gordon Smyth32k
1
vote
2
answers
1.6k
views
2
answers
Ballgown up and down regulated genes
differential expression ballgown written 22 months ago by psbpedrobarbosa0 • updated 7 months ago by kapeelc0
3
votes
1
answer
321
views
1
answer
2
votes
2
answers
449
views
2
answers
4
votes
2
answers
333
views
2
answers
2
votes
2
answers
262
views
2
answers
1
vote
1
answer
222
views
1
answer
0
votes
1
answer
288
views
1
answer
0
votes
1
answer
271
views
1
answer
0
votes
1
answer
567
views
1
answer
1
vote
1
answer
139
views
1
answer
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