Showing: differential expressionreset
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edgeR glmLRT with test="F"?
edger differential expression dge written 3.9 years ago by Ryan C. Thompson7.3k • updated 3.9 years ago by Aaron Lun23k
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Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 4.3 years ago by Fran├žois Lefebvre50 • updated 4.2 years ago by Alyssa Frazee210
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Ballgown up and down regulated genes
differential expression ballgown written 3.3 years ago by psbpedrobarbosa10 • updated 2.0 years ago by kapeelc0
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DESeq2 and edgeR getting very different results
edger deseq2 differential expression written 16 months ago by audrey.o.renson0 • updated 16 months ago by pablo_garcia0520
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Protein differential Expression analysis
proteomics differential expression written 15 months ago by cardin.julie0 • updated 15 months ago by Laurent Gatto1.1k
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Analysis of pathways using edgeR
rnaseq edger kegg differential expression written 13 months ago by fawazfebin30 • updated 13 months ago by Gordon Smyth37k
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DESeq2 1.20.0 lfcshrink function
deseq2 differential expression logfoldchange lfcthreshold lfcshrink written 10 months ago by emi.sch10 • updated 10 months ago by Michael Love23k
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Deconvolution RNA-Seq data
differential expression rna-seq written 4.1 years ago by carleshf10 • updated 4.1 years ago by James W. MacDonald49k
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Find differentially expressed values
edger differential expression differential gene expression written 3.9 years ago by Safana0 • updated 3.9 years ago by Gordon Smyth37k
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Differential expression on codelink data
codelink R differential expression written 3.9 years ago by Agaz Hussain Wani260 • updated 3.9 years ago by Diego Diez730
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Passing contrasts as a vector gives an error
limma R differential expression written 3.9 years ago by Agaz Hussain Wani260 • updated 3.9 years ago by Gordon Smyth37k
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12
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RPKM, CPM and TMM
rnaseq edger differential expression written 3.8 years ago by Pauly Lin80 • updated 3.8 years ago by Aaron Lun23k
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