Showing: differential expressionreset
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edgeR glmLRT with test="F"?
edger differential expression dge written 4.2 years ago by Ryan C. Thompson7.3k • updated 4.2 years ago by Aaron Lun24k
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DESeq2 1.20.0 lfcshrink function
deseq2 differential expression logfoldchange lfcthreshold lfcshrink written 14 months ago by emi.sch10 • updated 6 weeks ago by yusuf.zhc0
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Ballgown vs (voom,edgeR,DESeq,limma)
rnaseq limma differential expression voom written 4.6 years ago by Fran├žois Lefebvre50 • updated 4.6 years ago by Alyssa Frazee210
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Ballgown up and down regulated genes
differential expression ballgown written 3.6 years ago by psbpedrobarbosa10 • updated 2.3 years ago by kapeelc0
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DESeq2 and edgeR getting very different results
edger deseq2 differential expression written 20 months ago by audrey.o.renson0 • updated 20 months ago by pablo_garcia0520
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Protein differential Expression analysis
proteomics differential expression written 19 months ago by cardin.julie0 • updated 19 months ago by Laurent Gatto1.2k
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Analysis of pathways using edgeR
rnaseq edger kegg differential expression written 17 months ago by fawazfebin30 • updated 17 months ago by Gordon Smyth38k
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Deconvolution RNA-Seq data
differential expression rna-seq written 4.5 years ago by carleshf10 • updated 4.5 years ago by James W. MacDonald50k
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Find differentially expressed values
edger differential expression differential gene expression written 4.3 years ago by Safana0 • updated 4.3 years ago by Gordon Smyth38k
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Differential expression on codelink data
codelink R differential expression written 4.3 years ago by Agaz Hussain Wani260 • updated 4.3 years ago by Diego Diez730
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Passing contrasts as a vector gives an error
limma R differential expression written 4.2 years ago by Agaz Hussain Wani260 • updated 4.2 years ago by Gordon Smyth38k
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