dnaseq Posts

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ChIPseq-style peak calling for paired-end sequencing?

dnaseq chipseq bayespeak narrowpeaks atac written 4.4 years ago by samuel collombet • 140 • updated 4.4 years ago by Gordon Smyth ♦ 38k

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DEseq2 extended to open chromatin anlaysis: normalization, dispersion fit, and "too many" differences

dnaseq deseq2 written 5.1 years ago by hughes.drew • 90 • updated 5.1 years ago by Michael Love ♦ 25k

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Newbie - Adding Labels to Individual Genes with ggbio?

dnaseq genomicranges ggbio R ggplot2 written 4.3 years ago by fathniz • 0 • updated 4.3 years ago by arfranco • 130

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650

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Get a complete view of a long DNA sequence of a Biostrings object in R

dnaseq biostrings subsetting dnastring view written 4.1 years ago by arado1 • 0 • updated 4.1 years ago by James W. MacDonald ♦ 51k

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Doubt about WL in cn.mops

dnaseq dnacopy cn.mops cnv genomic written 15 months ago by cased • 0 • updated 15 months ago by Günter Klambauer • 540

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Bioconductor Employment: Statistical Research Associate

dnaseq cancer written 7.9 years ago by Martin Morgan ♦♦ 23k

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Job: Bioinformatics Analyst at University of Cambridge, Cancer Research UK Cambridge Institute

dnaseq rnaseq chipseq jobs job written 4.1 years ago by Rory Stark • 2.8k

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451

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any ideas on a workflow for exome seq data analysis with R?

dnaseq exome wes written 3.3 years ago by arvand.akbari • 0

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503

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Centipede foot printing export

dnaseq atac-seq footprinting centipede written 2.6 years ago by rbronste • 60

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why merged paired end reads still have strand infomation?

dnaseq rtracklayer paired-end reads written 2.3 years ago by zwfanwz678 • 0

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337

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How to identify Disease biomarkers " DNA sequences as biomarkers "

dnaseq pathway analysis biomarkers protein written 20 months ago by emadelhewihy • 0

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Doubt about the interpretation of cn.mops tumor vs normal results

dnaseq cn.mops bioinformatics written 14 months ago by cased • 0